CX296802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_DICDI (Eukaryotic translation initiation factor 1A OS=Dictyostelium discoideum GN=eif1a PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.947e-37 Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = -1 Query: 369 KRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 680 +RGKNE +++KREL FKE+GQEYAQVLRMLGNGR EA C DG KRLCHI G++ KK WI GDIIL+ LRDYQ+DKADVIL+Y DEAR LK YGELPE+ R+N Sbjct: 13 RRGKNE-NEQKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEKRLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARIN 115
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_YEAST (Eukaryotic translation initiation factor 1A OS=Saccharomyces cerevisiae GN=TIF11 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.079e-35 Identity = 67/104 (64.42%), Postives = 84/104 (80.77%), Query Frame = -1 Query: 369 KRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 680 +RGKN++D KREL++KE+GQEYAQ+ +MLGNGR EA C DG KR+ HIRGK+ KKVW+ GDIILV LRD+QDD+ DV+ KY DEAR LK GELPE+ ++N Sbjct: 13 RRGKNDSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKIN 116
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_SCHPO (Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces pombe GN=tif11 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.347e-34 Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = -1 Query: 369 KRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 680 +RGKNE ++EKREL + E+GQ YAQV +MLGNGR EA C DG KRL HIRGK+ KKVWI GDIIL+ LR++QD+K DVILKY DEAR LK GELPE+ ++N Sbjct: 13 RRGKNENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKIN 116
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_NATPD (Translation initiation factor 1A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = -1 Query: 381 ADDEKRELVFKEDGQE-YAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPES 662 +D+E R+ + +G E +A V MLG R + C+DGT+R I G+M K++WI D++LV D+QD+KADV+ +Y EA L+ G + +S Sbjct: 2 SDNEGRKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKADVVWRYEKQEADQLREEGHITDS 96
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_METKA (Translation initiation factor 1A OS=Methanopyrus kandleri GN=eIF1A PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = -1 Query: 384 GKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 674 GK D+ +++ ++G+ + V +MLGN R + C+DG R+ I GKM K+VWI GD++LV ++Q ++ADV +Y + LK G+L E Sbjct: 2 GKRIDDETLKKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQVDWLKRKGKLDE 98
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_HALMA (Translation initiation factor 1A OS=Haloarcula marismortui GN=eif1a PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 34/92 (36.96%), Postives = 55/92 (59.78%), Query Frame = -1 Query: 384 DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE 659 +D ++ L E+ + +A V+ MLG R + C+DG +R I GKM K++WI D++LV D+QD+KAD+ +Y +A L+ G + E Sbjct: 4 NDSRKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDADQLREEGHIQE 95
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_SULIY (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 408 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 647 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_SULIN (Translation initiation factor 1A OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 408 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 647 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_SULIM (Translation initiation factor 1A OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 408 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 647 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92
BLAST of CX296802 vs. ExPASy Swiss-Prot
Match: IF1A_SULIL (Translation initiation factor 1A OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 408 RELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLL 647 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD++LVG+ D+Q ++ D++ KY DE + L Sbjct: 13 RDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEIKRL 92 The following BLAST results are available for this feature:
BLAST of CX296802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296802 ID=CX296802; Name=CX296802; organism=Citrus clementina; type=EST; length=680bpback to top |