CX296809

Overview
NameCX296809
Unique NameCX296809
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.598e-13
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSES-KCDLLMAKPLHARAKPRL 416
            L H  T    +AGY IP  ++V     G+  +PNVW DP KF P+R +   +D          E++ + F  GRR C G+ + +    ++LAR++Q F W        VD SE  +  ++M  PL A+ K R+
Sbjct:  370 LTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDAD---ITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRAKVKLRI 499          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE 359
            +PH++  DA +AGY IP  S +L++   L  NP  WKDP  F PER +    +    VE    + R++ F  GRR C G+ L   +  + + R++Q F    P  +  +D SE
Sbjct:  375 VPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFL----EEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSE 483          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13
Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPR 413
            +PH++  DA + G+ IP  S +L++   L  NP  WK+P +F PER +    +   +VE    + R+L F  GRR C G+ L   +  + L RL+Q F    P  +  +D SE   +  L + K     AKPR
Sbjct:  375 VPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFL----EEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 46/133 (34.59%), Postives = 65/133 (48.87%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPR 413
            +PH++  DA + GY IP  S +L++   L  NP  WK P +F PER      +    VE    + R+L F  GRR C G+ L   +  + L RL+Q F    P  +  +D SE   +  L + K     AKPR
Sbjct:  376 VPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFF----EEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPR 504          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPR 413
            +PH++  DA + G+ IP  S +L++   L  NP +WK P +F PER +    +    VE    + R+L F  GRR C G+ L   +  + + RL+Q F    P  +  +D SE   +  L + K     AKPR
Sbjct:  375 VPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFL----EEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESK-CDLLMAKPLHARAKPR 413
            +P   T D  I GY +P+ + V+++   + R+P +W++P KF P+R+       ++  +L       + F  GRR C G  LG  +  + L  L+Q F W     EEM D+SES    +    PL A  +PR
Sbjct:  369 IPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDYYVYKL-------MPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEM-DMSESTGLGMRKMDPLRAMCRPR 492          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 42/134 (31.34%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   18 NLPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPER-HIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSESKCDLLMAKPLHARAKPRL 416
            +L H  T  A + GY IP G +V +   G+  +PN+W +P KF P+R ++G  D     V    + ++ + F  GRR C G+ + +    ++LARL+Q F W+ P +  +    + +  ++M   L A+ KPR+
Sbjct:  382 SLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGV----SGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVDFTEKLEFTVVMKNTLRAKIKPRM 511          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 45/133 (33.83%), Postives = 68/133 (51.13%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE--SKCDLLMAKPLHARAKPR 413
            +PH++  DA + G+ IP  S +L++   L  NP  WK+P +F PER +    +   +VE    + R+L F  GRR C G+ L   +  + L RL+Q F    P  +  +D SE   +  L + K     AKPR
Sbjct:  375 VPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFL----EEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPR 503          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 36/113 (31.86%), Postives = 57/113 (50.44%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTPSDEEMVDLSE 359
            +P ++  D  + GY +P G+ V+++   +GR+P  W +P KF PER + S       V+    +   + F  GRRGC G           LA L+Q F+W  P +   +D+SE
Sbjct:  377 VPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNS------SVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSE 483          
BLAST of CX296809 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.558e-13
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 3
Query:   21 LPHLSTRDATIAGYFIPKGSHVLLSRIGLGRNPNVWKDPLKFIPERHIGSVDDHHHQVELAETELRFLSFSRGRRGCMGMALGSEMSVMLLARLLQGFNWSTP 329
            +P  + +D    GY +PK + VL++   +GR+P  W DP+ F PER +GS      ++++       + F  GRR C+G+ LG  M    L  LL+ F W  P
Sbjct:  378 IPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGS------KIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELP 474          
The following BLAST results are available for this feature:
BLAST of CX296809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
C77A1_SOLME2.598e-1333.08Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
TCMO_RUTGR3.393e-1334.51Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_POPTM3.393e-1333.83Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_SOYBN4.431e-1334.59Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PEA4.431e-1333.08Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C81F1_ARATH4.431e-1331.82Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C77A2_SOLME4.431e-1331.34Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
TCMO_POPKI5.787e-1333.83Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C71A8_MENPI5.787e-1331.86Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C76A2_SOLME7.558e-1333.98Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]

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Properties
Property NameValue
Genbank descriptionC05803A12SK FerrChloL1 Citrus clementina cDNA clone C05803A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296809 ID=CX296809; Name=CX296809; organism=Citrus clementina; type=EST; length=560bp
CCGAATTCGGCACGAGGAACCTGCCTCATCTTTCAACTCGCGATGCCACT
ATCGCCGGTTACTTCATTCCCAAAGGCAGTCACGTTCTGCTGAGCCGAAT
AGGGCTTGGCCGGAACCCTAACGTCTGGAAAGATCCATTGAAATTCATAC
CTGAACGTCATATTGGTTCAGTGGACGATCATCATCATCAAGTAGAGTTG
GCGGAAACAGAATTACGATTCCTTTCATTCAGCAGAGGAAGACGCGGTTG
CATGGGCATGGCACTTGGGTCCGAGATGTCTGTAATGCTTTTGGCAAGGC
TTCTTCAAGGTTTTAATTGGAGCACGCCATCGGATGAGGAGATGGTTGAC
CTTTCCGAGTCAAAATGCGACCTCCTAATGGCTAAGCCACTGCATGCTCG
TGCAAAGCCCCGCTTGCCTGCTGATTTATACCCAGCTAATAATTAAATGA
TGTTAACCGTTCTTTATGTTATCTTCATTCTTTAATTTAATGTAATTCTT
CATTATCTCACGATTTATCTATCTTGAACGCTTTGCCATCTCGAAAAGGG
GGGGCCCGGT
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