CX296816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 63/196 (32.14%), Postives = 84/196 (42.86%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG+VE R P + ++ YPGG F DPL LA D + LKV EIK+ RLAM +M F+ +A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDPI------------------YPGGAF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFVQA 231
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13 Identity = 62/197 (31.47%), Postives = 81/197 (41.12%), Query Frame = -1 Query: 145 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 678 +P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV IK+ RLAM +M F+ +A Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------EDPEAFAELKVKHIKNGRLAMFSMFGFFVQA 233
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 61/196 (31.12%), Postives = 81/196 (41.33%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG +E R A + YPGG FDPL LA D E +KV E+K+ RLAM +M F+ +A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEG--------------------YRVAGGPLGEVVDPLYPGGT-FDPLGLA---------DDPEAFADVKVKELKNGRLAMFSMFGFFVQA 231
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 61/196 (31.12%), Postives = 80/196 (40.82%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL DP RE E+IH WAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG F DPL LA D E LKV E+K+ RLAM +M F+ +A Sbjct: 7 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR--------------------IAGGPLGEVTDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQA 172
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 63/196 (32.14%), Postives = 82/196 (41.84%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ W +AG+ +P + S ++ Q+LLMG VE R A + YPGG F DPL LA D E LKV E K+ RLAM +M F+ +A Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR--------------------VAGGPLGVVVDPLYPGGSF-DPLGLA---------EDPEAFAELKVKETKNGRLAMFSMFGFFIQA 233
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 62/196 (31.63%), Postives = 83/196 (42.35%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF-------VGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL P RE E+IH R AM+A +G +GQ + WF+AGA +P + S ++ T+++LMG VE R A + YPG FD L LA DTE LKV E+K+ RLAM +M F+ +A Sbjct: 70 PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYR--------------------IARGPLGEVTDPLYPGS--FDSLGLA---------EDTEAFAELKVKELKNGRLAMFSMFGFFVQA 234
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 62/196 (31.63%), Postives = 80/196 (40.82%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D L DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A Sbjct: 68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 233
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13 Identity = 61/196 (31.12%), Postives = 81/196 (41.33%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL DPA R+ E+IH RW M +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E L+V EIK+ RLAM +M F+ +A Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------DDPEAFAELEVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 62/196 (31.63%), Postives = 82/196 (41.84%), Query Frame = -1 Query: 145 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 675 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R P + V + YPGG FDPL LA + LKV EIK+ RLAM +M F+ +A Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGEIV------------------DPLYPGGS-FDPLGLA---------ERPQAFAELKVKEIKNGRLAMFSMFGFFVQA 232
BLAST of CX296816 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 63/199 (31.66%), Postives = 84/199 (42.21%), Query Frame = -1 Query: 145 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS---GIP------WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 678 +P G PGDYG+D GL DP K YRE ELIH R + +G+ + + GI WF+AGA +P I + + L Q++LMG VE R P + ++ P G+ FDPL LA D + LKV EIK+ RLAM A L F+ +A Sbjct: 72 HPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPLYP-------------------GEAFDPLGLA---------DDPDTFAELKVKEIKNGRLAMFACLGFFVQA 240 The following BLAST results are available for this feature:
BLAST of CX296816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296816 ID=CX296816; Name=CX296816; organism=Citrus clementina; type=EST; length=723bpback to top |