CX296830

Overview
NameCX296830
Unique NameCX296830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.279e-27
Identity = 70/160 (43.75%), Postives = 92/160 (57.50%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +G GG G VYK  LP  NG ++A+K+ ++ P    E+             Q ++E+  +G   HRNLL L      P+  +LVY +M NGS+ D L D    +  LDW  R  IALG A GL YLH   NP+IIHRD+K AN+LLD+  EA + DFGLAK
Sbjct:  306 LGQGGFGMVYKGYLP--NGTVVAVKR-LKDPIYTGEV-------------QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAK 449          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.583e-26
Identity = 67/168 (39.88%), Postives = 95/168 (56.55%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            DG ++   +G GG G+VYK  L  ++G ++A+K++ +      EL             Q ++E+  +    HRNLL L      P   LLVY +M NGS+   L +    +  LDW  R +IALG A GL YLH   +P+IIHRD+K AN+LLD++ EA + DFGLAK
Sbjct:  300 DGFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERTPGGEL-------------QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 452          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.067e-26
Identity = 82/236 (34.75%), Postives = 120/236 (50.85%), Query Frame = 1
Query:   28 SGFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDSG-------PAIFSPLIKKAEDLAFLEKE-----DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            S  I GAIAG ++    ++LF +   A+    R          PA   P +   +   F  +E     D  ++   +G GG G+VYK  L  ++G ++A+K++ +      EL             Q ++E+  +    HRNLL L      P   LLVY +M NGS+   L +  + +  LDW  R +IALG A GL YLH   +P+IIHRD+K AN+LLD++ EA + DFGLAK
Sbjct:  220 SNRITGAIAGGVAAGA-ALLFAVPAIALAWWRRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERTQGGEL-------------QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 439          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 84/243 (34.57%), Postives = 130/243 (53.50%), Query Frame = 1
Query:   10 KAAGWISGFIAGAIAGTISGFV----FSVLFKLILAAVRGGSRDSGPAIFSPLIKKAEDLA------FLEKEDGLAS---LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            K +G   G   G I G I+ F+     +++F +  +  +  +R+       PL K   ++       F E +   +S   L +IG GG G+VYK  LPG  G ++A+K+             E   L  +K  +  +EI  + ++ HRNL+ LL +  +    +LVYE+M NGSLQD L+  ++ R+ L    R +IALG A G+ YLH   +P IIHRD+KP+N+LLD  M  ++ADFG++K
Sbjct:  554 KKSGMSIGVSVGIIIGAIAFFLVLSSLALVFFIKRSKRKRKTREVDMEQEHPLPKPPMNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPG--GLVVAVKRA------------EQGSLQGQK--EFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALS--ARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISK 778          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 85/235 (36.17%), Postives = 114/235 (48.51%), Query Frame = 1
Query:   28 SGFIAGAIAGTISGFVFSVLFKLILAAVRGGSRD-----SGPAIFSPLIKKAEDLAFLEKE---DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQ---PPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            +G IAG +AG        +LF       +G  RD     +G         + +  A+ E +   D  +    +G GG G+VYK  LP +    +A+K++     P  DAA                 + E+  +    HRNLL L+         LLVY FM+N SL   L ++  G   LDW  R +IALG A G EYLH   NP+IIHRD+K ANVLLD+D EA + DFGLAK
Sbjct:  224 TGIIAGVVAGVTVVLFGILLFLFCKDRHKGYRRDVFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNT--KVAVKRLTDFESPGGDAA----------------FQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 440          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVI-QPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTY 723
            IG G    VYK  L  S  + IAIK++  Q P +               +R+  +E+ T+G IRHRN++ L  +   P  +LL Y++M+NGSL D+L+  S  + +LDW  R KIA+G A GL YLH    PRIIHRD+K +N+LLD++ EA ++DFG+AK+     T+
Sbjct:  654 IGYGASSTVYKCALKSS--RPIAIKRLYNQYPHN---------------LREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHG-SLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTH 804          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26
Identity = 70/167 (41.92%), Postives = 98/167 (58.68%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLA 696
            +  A    IGSG  G VY+A LP  NGK+ A+KK+    K A+E  ++D + +          +N +  IRH N++ L+ + A  D  LLVYE+  NG+LQD L+   + +++L W  R  +ALG A  LEYLH    P IIHR+ K ANVLLDDD+   ++D GLA
Sbjct:  483 ESFAQENLIGSGMLGSVYRARLP--NGKLFAVKKL---DKRASE-QQQDHEFIEL--------VNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLA 635          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26
Identity = 69/184 (37.50%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  178 AFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            A +   +    + K+G GG GEVYK   P  +G  +A+K++              SK   +  R+  +E+  V +++HRNL+ LL +    +  +LVYEF+ N SL   L D +  +R+LDW  R+KI  G+A G+ YLH      IIHRDLK  N+LLD DM  ++ADFG+A+   M  T  N
Sbjct:  500 AIVAATNNFLPINKLGQGGFGEVYKGTFP--SGVQVAVKRL--------------SKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTM-KRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEAN 666          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.605e-26
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 1
Query:  211 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNT 720
            + K+G GG GEVYK  L  S+G  +A+K++              SK   +  ++  +E+  V +++HRNL+ LL +    +  +LVYEF+ N SL   L D S  + +LDW  R+KI  G+A G+ YLH      IIHRDLK  N+LLDDDM  +IADFG+A+   M  T
Sbjct:  329 INKLGQGGFGEVYKGTL--SSGLQVAVKRL--------------SKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFD-STMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQT 481          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.015e-26
Identity = 69/169 (40.83%), Postives = 98/169 (57.99%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVI-QPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTY 723
            IG G    VYK        + IAIK++  Q P +                R+  +E+ T+G IRHRN++ L  +   P  +LL Y++M+NGSL D+L+   + + +LDW  R KIA+G A GL YLH    PRIIHRD+K +N+LLD + EAR++DFG+AK+     TY
Sbjct:  657 IGYGASSTVYKCT--SKTSRPIAIKRIYNQYPSN---------------FREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGK-KVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTY 807          
The following BLAST results are available for this feature:
BLAST of CX296830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
Y5457_ARATH9.279e-2743.75Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH1.583e-2639.88Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
BAK1_ARATH2.067e-2634.75BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5374_ARATH2.700e-2634.57Probable LRR receptor-like serine/threonine-protei... [more]
Y5129_ARATH2.700e-2636.17Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH2.700e-2641.42LRR receptor-like serine/threonine-protein kinase ... [more]
SRF3_ARATH3.526e-2641.92Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
CRK23_ARATH3.526e-2637.50Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH4.605e-2640.59Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
ERL2_ARATH6.015e-2640.83LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC05803C09SK FerrChloL1 Citrus clementina cDNA clone C05803C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296830 ID=CX296830; Name=CX296830; organism=Citrus clementina; type=EST; length=742bp
AAGGGAAAGAAGGCAGCTGGGTGGATTTCAGGATTTATTGCTGGAGCAAT
AGCGGGTACTATTTCTGGGTTCGTGTTTTCTGTTCTTTTTAAGCTAATCT
TGGCGGCGGTAAGGGGTGGAAGTAGAGATTCTGGCCCAGCAATCTTTAGT
CCATTAATCAAGAAAGCTGAGGACTTAGCTTTCTTGGAAAAAGAAGATGG
TCTTGCTTCGTTGGAGAAAATAGGATCAGGTGGATGCGGAGAAGTTTACA
AAGCTGAGCTACCTGGAAGCAATGGAAAGATGATTGCTATTAAGAAGGTT
ATTCAACCTCCAAAGGATGCCGCAGAATTGACTGAAGAAGATAGTAAGTT
ACTGAACAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGTC
AAATTAGGCACAGGAATCTTCTCCCTCTGCTGGCTCATATGGCCAGGCCT
GACTGCCACTTACTGGTGTACGAATTCATGAAGAACGGAAGTTTACAGGA
CATTCTAAATGATGTCTCGCAAGGAAGAAGAGAATTAGACTGGCTAGCTA
GGCATAAGATCGCATTGGGAGTAGCTTGCGGGCTTGAGTATCTGCATATA
AGCCACAACCCTCGCATAATCCACAGAGATCTCAAGCCAGCGAACGTGCT
TCTTGACGATGATATGGAAGCCAGGATCGCTGATTTTGGGCTTGCAAAGG
CATGCCTGATGCACAACACATATTACAACTTCAATGTGGCCG
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