CX296830

Overview
NameCX296830
Unique NameCX296830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.685e-25
Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 1
Query:  205 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            A   KIG GG GEVYK     SNGK +A+K++              SK   +   + ++E+  V +++HRNL+ LL    + +  +LVYE+M N SL  +L D ++ + +LDW+ R+ I  G+A G+ YLH      IIHRDLK +N+LLD D+  +IADFG+A+   +  T  N
Sbjct:  354 AESNKIGRGGFGEVYKGTF--SNGKEVAVKRL--------------SKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTK-QTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDN 511          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.685e-25
Identity = 70/171 (40.94%), Postives = 95/171 (55.56%), Query Frame = 1
Query:  217 KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            K+G GG GEVYK   P  +G  +A+K++              SK   +  R+  +E+  V +++HRNL+ LL      D  +LVYEF+ N SL   + D S  +  LDW  R+KI  G+A G+ YLH      IIHRDLK  N+LL DDM A+IADFG+A+   M  T  N
Sbjct:  356 KLGQGGFGEVYKGIFP--SGVQVAVKRL--------------SKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFD-STMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEAN 509          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.134e-24
Identity = 71/186 (38.17%), Postives = 101/186 (54.30%), Query Frame = 1
Query:  142 IFSPLIKKAEDLAFLEKEDGLASLEKI-GSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLA 696
            I SP+      ++ L+      S E I G G  G VY+AE P  NGK++AIKK+      A  L EED+ L           ++ + ++RH N++PL  +       LLVYE++ NG+L D L+        L W AR K+ALG A  LEYLH    P I+HR+ K AN+LLD+++   ++D GLA
Sbjct:  374 IRSPITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFP--NGKIMAIKKI---DNAALSLQEEDNFL---------EAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLA 545          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.134e-24
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 1
Query:  220 IGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTY 723
            IG G    VYK  L   N K +AIK++      +              M+Q  +E+  +  I+HRNL+ L A+       LL Y++++NGSL D+L+  ++ ++ LDW  R KIA G A GL YLH   +PRIIHRD+K +N+LLD D+EAR+ DFG+AK+  +  ++
Sbjct:  654 IGHGASSTVYKCVL--KNCKPVAIKRLYSHNPQS--------------MKQFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTK-KKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSH 804          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.134e-24
Identity = 77/224 (34.38%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   31 GFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDSGPAIFSPLIKKAEDLAFLEKED-GLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            GF    +  T  G V SVL  L++  V    R + P   SP      DL  +E      +    +G GG GEV+K  L   +G  IA+K++              SK   + +++ ++E + V +++HRNL+ +L      +  +LVYEF+ N SL   L + ++ + +LDW  R+KI +G A G+ YLH     +IIHRDLK +N+LLD +ME ++ADFG+A+
Sbjct:  266 GFFVAIVVAT--GVVISVLSTLVVVLVCR-KRKTDPPEESPKYSLQYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVL--QDGSEIAVKRL--------------SKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTK-KGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMAR 469          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24
Identity = 80/251 (31.87%), Postives = 118/251 (47.01%), Query Frame = 1
Query:   28 SGFIAGAIAGTISGFVFSVLFKLILAAVRGGSRDSGPAIFSPLIKKAEDLAFLEKEDGLASLE-------------KIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYNFNVA 741
            +G +AG +      F   VL  L L    GG            + + E+L  L+ + G  +L+             KIG GG G VYK  L  ++G  IA+K++    K                 R+  +EI  +  ++H NL+ L          LLVYE+++N SL   L    + R  LDW  R+K+ +G+A GL YLH     +I+HRD+K  NVLLD  + A+I+DFGLAK     NT+ +  +A
Sbjct:  606 NGVVAGIVIAACVAFGLLVLVILRLTGYLGGKE----------VDENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVL--ADGMTIAVKQLSSKSKQGN--------------REFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIA 830          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24
Identity = 68/206 (33.01%), Postives = 107/206 (51.94%), Query Frame = 1
Query:  115 GGSRDSGPAIFSPLIKKAE----------DLAFLE-KEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            G     GP   SPL+   E           L  LE   +  A +  +G GG G VY+ +L   NG  +A+KK++                L +  ++ R E+  +G +RH+NL+ LL +       +LVYE++ +G+L+  L+   +    L W AR KI  G A  L YLH +  P+++HRD+K +N+L+DD+  A+++DFGLAK
Sbjct:  143 GRQYGGGPVTASPLVGLPEISHLGWGHWFTLRDLELATNRFAPVNVLGEGGYGVVYRGKLV--NGTEVAVKKLLNN--------------LGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAK 332          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24
Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1
Query:  196 DGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAK 699
            D  ++   +G GG G+VYK  L  ++G ++A+K++ +      EL             Q ++E+  +    HRNLL L      P   LLVY +M NGS+   L +    +  L W  R +IALG A GL YLH   +P+IIHRD+K AN+LLD++ EA + DFGLA+
Sbjct:  303 DSFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERTPGGEL-------------QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAR 455          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24
Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 1
Query:  205 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            A   KIG GG GEVYK     SNGK +A+K++              SK   +   + ++E+  V +++HRNL+ LL    + +  +LVYE+M N SL  +L D ++ + +LDW+ R+ I  G+A G+ YLH      IIHRDLK +N+LLD D+  +IADFG+A+   +  T  N
Sbjct:  352 AESNKIGRGGFGEVYKGTF--SNGKEVAVKRL--------------SKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTK-QIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDN 509          
BLAST of CX296830 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.481e-24
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 1
Query:  178 AFLEKEDGLASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELTEEDSKLLNKKMRQIRSEINTVGQIRHRNLLPLLAHMARPDCHLLVYEFMKNGSLQDILNDVSQGRRELDWLARHKIALGVACGLEYLHISHNPRIIHRDLKPANVLLDDDMEARIADFGLAKACLMHNTYYN 729
            A +   D    + K+G GG GEVYK   P  +G  +A+K++              SK   +  ++  +E+  V +++HRNL+ LL +    +  +LVYEF+ N SL   L D +  + +LDW  R+KI  G+A G+ YLH      IIHRDLK  N+LLD DM  ++ADFG+A+   M  T  N
Sbjct:  336 AIVAATDIFLPINKLGQGGFGEVYKGTFP--SGVQVAVKRL--------------SKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTM-QGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEAN 502          
The following BLAST results are available for this feature:
BLAST of CX296830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 362
Match NameE-valueIdentityDescription
CRK8_ARATH8.685e-2538.86Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK4_ARATH8.685e-2540.94Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
SRF8_ARATH1.134e-2438.17Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
ERECT_ARATH1.134e-2439.29LRR receptor-like serine/threonine-protein kinase ... [more]
CRK33_ARATH1.134e-2434.38Putative cysteine-rich receptor-like protein kinas... [more]
Y5344_ARATH1.481e-2431.87Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH1.481e-2433.01Probable receptor-like protein kinase At2g42960 OS... [more]
SERK2_ARATH1.481e-2438.10Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK6_ARATH1.481e-2438.86Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK20_ARATH1.481e-2436.96Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05803C09SK FerrChloL1 Citrus clementina cDNA clone C05803C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296830 ID=CX296830; Name=CX296830; organism=Citrus clementina; type=EST; length=742bp
AAGGGAAAGAAGGCAGCTGGGTGGATTTCAGGATTTATTGCTGGAGCAAT
AGCGGGTACTATTTCTGGGTTCGTGTTTTCTGTTCTTTTTAAGCTAATCT
TGGCGGCGGTAAGGGGTGGAAGTAGAGATTCTGGCCCAGCAATCTTTAGT
CCATTAATCAAGAAAGCTGAGGACTTAGCTTTCTTGGAAAAAGAAGATGG
TCTTGCTTCGTTGGAGAAAATAGGATCAGGTGGATGCGGAGAAGTTTACA
AAGCTGAGCTACCTGGAAGCAATGGAAAGATGATTGCTATTAAGAAGGTT
ATTCAACCTCCAAAGGATGCCGCAGAATTGACTGAAGAAGATAGTAAGTT
ACTGAACAAGAAAATGAGGCAAATTCGGTCTGAGATTAACACTGTGGGTC
AAATTAGGCACAGGAATCTTCTCCCTCTGCTGGCTCATATGGCCAGGCCT
GACTGCCACTTACTGGTGTACGAATTCATGAAGAACGGAAGTTTACAGGA
CATTCTAAATGATGTCTCGCAAGGAAGAAGAGAATTAGACTGGCTAGCTA
GGCATAAGATCGCATTGGGAGTAGCTTGCGGGCTTGAGTATCTGCATATA
AGCCACAACCCTCGCATAATCCACAGAGATCTCAAGCCAGCGAACGTGCT
TCTTGACGATGATATGGAAGCCAGGATCGCTGATTTTGGGCTTGCAAAGG
CATGCCTGATGCACAACACATATTACAACTTCAATGTGGCCG
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