CX296833

Overview
NameCX296833
Unique NameCX296833
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: AAT_AQUAE (Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.788e-14
Identity = 47/179 (26.26%), Postives = 89/179 (49.72%), Query Frame = 1
Query:    4 EELNVIASLCIENDVLVFSDEVYDKLAF-EMDHISIASLPGMYER-TVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPET--YYEELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHET--DIAFCEYLIKEVGVVAIPTSVF 519
            EEL  IA  C+E  + + SDE Y+   + +   +S AS     +  T T+N+  K++S+TGW+IG+   P      +   +S      +T  Q+ A  AL+ P++  +  E++  +  ++   VE L+ + G  V    G +++  D + +  +   D+   E+L+++  V  +P S F
Sbjct:  185 EELKKIAEFCVERGIFIISDECYEYFVYGDAKFVSPASFSDEVKNITFTVNAFSKSYSMTGWRIGYVACPEEYAKVIASLNSQSVSNVTTFAQYGALEALKNPKSKDFVNEMRNAFERRRDTAVEELSKIPGMDVVKPEGAFYIFPDFSAYAEKLGGDVKLSEFLLEKAKVAVVPGSAF 363          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: DAPAT_AQUAE (LL-diaminopimelate aminotransferase OS=Aquifex aeolicus GN=dapL PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14
Identity = 53/191 (27.75%), Postives = 93/191 (48.69%), Query Frame = 1
Query:   37 ENDVLVFSDEVYDKLAFEMDHI-SIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAVDRM 606
            E +V++ SD  Y ++    +   SI  +PG  +  +  +SL KT+++TGW+IG A+    L  G+ +  + +       +Q A   AL  PE   E+++  Y  +K I+ E L  +G +++ S  T+++ +   P G+ T   F   LI E G+V  P + F    E G+   R +       L  A +R+
Sbjct:  197 EYNVIIASDNAYSEIYTGQEKPPSILQVPGAKDVAIEFHSLSKTYNMTGWRIGMAVGNKELVAGLGKVKTNVDSGQFGAVQDAGIVALNLPEEEVEKIRDVYRERKKIMTEALEKIGLEIYRSDYTFYLWI-KVPEGY-TSAEFVGRLIDEAGIVCTPGNGF---GEYGEGYFRISLTVPTERLLEAAERI 382          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: YFDZ_ECOLI (Uncharacterized aminotransferase yfdZ OS=Escherichia coli (strain K12) GN=yfdZ PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 51/195 (26.15%), Postives = 90/195 (46.15%), Query Frame = 1
Query:   19 IASLCIENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAV 597
            + +L    DVLV  D  Y  + ++     SI  +PG  +  V   +L K++++ GW+IG+ +    L   + +  S+  + T TP+Q AA AAL   +    ++   Y  ++ +LV+GL+  G+ V  P +  Y       P+     + F + L+ E  V   P   F    + G   VRF   ++   +R A+
Sbjct:  196 VVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGF---GDYGDTHVRFALIENRDRIRQAI 387          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: DAPAT_DESVM (LL-diaminopimelate aminotransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=dapL PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 47/198 (23.74%), Postives = 96/198 (48.48%), Query Frame = 1
Query:   19 IASLCIENDVLVFSDEVYDKLAFEMDH--ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAVDRM 606
            +  +C +++V++  D  Y ++ ++ +   +SI  + G  + T+  +SL KT+++TGW++G A+    L  G+ +    +       +Q A+  ALR  + +  EL+  Y  ++ ++V  LN VG      +  +++     P G+ +   F   ++++ GVV  P + F      G+   R +   D   L  AV R+
Sbjct:  193 LIGICRKHNVIIAHDTAYTEVYYDENDKPMSILEVEGAKDVTIEFHSLSKTYNMTGWRVGMAVGNASLVAGLGKVKENVDSGIFQAVQEASIVALRDGDDFCRELRGIYRKRRDVVVAALNKVGIACRVPTAAFYIWA-KVPAGYGSSAEFVTAVLEKTGVVLTPGNGF---GTPGEGYFRISLTVDTDRLEEAVSRI 386          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: DAPAT_HALOH (LL-diaminopimelate aminotransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dapL PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 45/189 (23.81%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   43 DVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAVDRM 606
            D+++  D  Y ++  +  +  S     G  +  +  NSL K F++TGW++GWA+    +   + +  + +       +Q+A   AL  PE   E++   YS ++ +LVEGL  +G++V  +  T+++     P G+ +   F  ++ ++ G+   P + +    E G+  VR      E  ++ A++R+
Sbjct:  198 DIIIAHDAAYSEIGLDGYNPPSFMQFEGAKKVGIEFNSLSKPFNMTGWRVGWAVGRSDVIESLGRIKTNIDSGIFEAIQYAGIEALTGPEDNIEKMTELYSKRRDLLVEGLRELGWEVPVNKATFYIWA-KVPEGYNS-TEFSTHVFEKTGIFFTPGNGY---GEFGEGYVRIALTVTEERIKEALERL 381          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: DAPAT_DESAP (LL-diaminopimelate aminotransferase OS=Desulforudis audaxviator (strain MP104C) GN=dapL PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12
Identity = 44/158 (27.85%), Postives = 80/158 (50.63%), Query Frame = 1
Query:   37 ENDVLVFSDEVYDKLAFE-MDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIP 507
            E  +LV  D  Y ++AF+     S   + G  E  +  +S+ KT+++TGW+ GWA         + +  S L       +Q+AA AAL  P+   + L   Y  ++ ++V+ LN +G+++     T+++     P GH+   +F E ++++ GVV  P
Sbjct:  198 EYGILVCHDAAYSEIAFDGYRPPSFLEVAGAREVGIEFHSVSKTYNMTGWRAGWAAGNAGAVEALGRLKSNLDSGVFQVVQYAAIAALNGPQDGVQSLCEMYRERRDLVVDTLNDLGWRLTRPRATFYIWAP-VPAGHDAS-SFAEMVLEKAGVVITP 353          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: DAPAT_DESDG (LL-diaminopimelate aminotransferase OS=Desulfovibrio desulfuricans (strain G20) GN=dapL PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11
Identity = 49/193 (25.39%), Postives = 91/193 (47.15%), Query Frame = 1
Query:   37 ENDVLVFSDEVYDKLAFEMDH--ISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVGFKV-FPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAVDRM 606
            +++V+V  D  Y ++ +  ++  +SI  +PG  +  +  NSL K +++TGW+I  A+    L  G+ +    +       +Q AA  ALR  + +  E++  Y  ++  ++  LN +G     P +  Y  V    P G+ T   F   +++E GVV  P + F      G+   R +   ++  L  AV R+
Sbjct:  199 KHNVIVVHDAAYTEMYYNENNRPLSIMEIPGAMDVAIEFNSLSKPYNMTGWRIAMAVGNASLVAGLGKVKENMDSGAFQAVQEAAIVALRDGDAFLAEIRDIYRKRRDTVIAALNKIGITCRVPEASLY--VWARVPEGY-TSSDFVTRVLQETGVVMTPGNGF---GAAGEGYFRISLTVNDERLEEAVSRI 385          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: AAT_SULSO (Aspartate aminotransferase OS=Sulfolobus solfataricus GN=aspC PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11
Identity = 49/208 (23.56%), Postives = 102/208 (49.04%), Query Frame = 1
Query:    7 ELNVIASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL--TWGVRQAHSFLTFATSTPMQWAATAALRAPETYYE--ELKRDYSAKKAILVEGLNAV-GFKVFPSSGTYFVVVDHTPFGHETDI---AFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAVDRM 606
            ++  I  +  +N +++ SDE+YD   +E    S        +  + +N   KTFS+TGW++G+ +A   +    G+  A+ +     + P  +   AA++A +T+ E  ++   +  ++ ++ + L  V G +V   +G +++  + +     +     +    LI+E GVV IP  VF LN   GK  +R +F  +E  ++  + ++
Sbjct:  191 DVKKIVDISRDNKIILLSDEIYDNFVYEGKMRSTLEDSDWRDFLIYVNGFSKTFSMTGWRLGYIVAKREIIQKMGILAANVY-----TAPTSFVQKAAVKAFDTFDEVNQMVSLFKKRRDVMYDELTKVKGVEVSKPNGAFYMFPNVSKILKTSGFDVKSLAIKLIEEKGVVTIPGEVFPLN--IGKEFLRLSFAVNEEVIKEGIQKI 391          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: AAT_RICFE (Aspartate aminotransferase OS=Rickettsia felis GN=aatA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 52/187 (27.81%), Postives = 89/187 (47.59%), Query Frame = 1
Query:    4 EELNVIASLCIEND-VLVFSDEVYDKLAFE-MDHISIASL-PGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAALRAPETYYEELKRDYSAKKAILVEGLNAVG-FKVFPSSGTYFVVVD-HTPFGHETDIA--------FCEYLIKEVGVVAIPTSVFYL 525
            EEL  IA +  +   V V SD++Y+ + F+     ++A + P + ER  T+N + K +S+TGW+IG+ +    L   +    S  T    +  Q AA  +L  P+ Y +    ++  K+ + +  L  V  F+ +   G +++ V     FGH+T           F EYL++E  V  +P   F L
Sbjct:  184 EELENIAKVLRKYPHVNVMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKAYSMTGWRIGYGVGSKALIKAMTIIQSQSTSNPCSISQMAAIESLNGPQDYIKPNALNFQKKRDLALSILKRVKYFECYKPEGAFYLFVKCDKIFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIAFGL 370          
BLAST of CX296833 vs. ExPASy Swiss-Prot
Match: AAT2_METJA (Probable aspartate aminotransferase 2 OS=Methanocaldococcus jannaschii GN=MJ0684 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 46/197 (23.35%), Postives = 89/197 (45.18%), Query Frame = 1
Query:   19 IASLCIENDVLVFSDEVYDKLAFEMDHISIASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAATAAL-RAPETYYEELKRDYSAKKAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHETDIAFCEYLIKEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEGTLRSAVDRM 606
            I     EN   + SDE+Y+ L +E    S        E+T+ +N   K +++TGW+IG+ I+   +   + +    L  +  T  Q+AA  A  +  E     + +++  ++ ++++ +   G++V    G Y+V  +    G E    F   L+KE  V   P   F      GKN +R ++      ++  ++R+
Sbjct:  175 IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGEDGRE----FAYKLLKEKFVALTPGIGF---GSKGKNYIRISYANSYENIKEGLERI 364          
The following BLAST results are available for this feature:
BLAST of CX296833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AAT_AQUAE1.788e-1426.26Aspartate aminotransferase OS=Aquifex aeolicus GN=... [more]
DAPAT_AQUAE3.983e-1427.75LL-diaminopimelate aminotransferase OS=Aquifex aeo... [more]
YFDZ_ECOLI1.159e-1326.15Uncharacterized aminotransferase yfdZ OS=Escherich... [more]
DAPAT_DESVM3.372e-1323.74LL-diaminopimelate aminotransferase OS=Desulfovibr... [more]
DAPAT_HALOH7.511e-1323.81LL-diaminopimelate aminotransferase OS=Halothermot... [more]
DAPAT_DESAP2.854e-1227.85LL-diaminopimelate aminotransferase OS=Desulforudi... [more]
DAPAT_DESDG4.122e-1125.39LL-diaminopimelate aminotransferase OS=Desulfovibr... [more]
AAT_SULSO4.122e-1123.56Aspartate aminotransferase OS=Sulfolobus solfatari... [more]
AAT_RICFE5.383e-1127.81Aspartate aminotransferase OS=Rickettsia felis GN=... [more]
AAT2_METJA5.383e-1123.35Probable aspartate aminotransferase 2 OS=Methanoca... [more]

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Properties
Property NameValue
Genbank descriptionC05803C12SK FerrChloL1 Citrus clementina cDNA clone C05803C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296833 ID=CX296833; Name=CX296833; organism=Citrus clementina; type=EST; length=736bp
AGGGAGGAACTTAATGTTATTGCATCTCTTTGCATTGAGAATGATGTGTT
GGTTTTTAGTGATGAGGTCTATGATAAGTTGGCTTTTGAAATGGATCACA
TTTCCATAGCCTCTCTTCCTGGAATGTATGAGCGTACTGTAACCATGAAT
TCCTTAGGGAAGACATTCTCTTTAACAGGGTGGAAGATCGGGTGGGCAAT
AGCTCCACCGCACCTTACATGGGGGGTGCGGCAGGCACACTCTTTTCTCA
CGTTTGCCACATCCACTCCAATGCAGTGGGCAGCTACAGCAGCCCTTAGA
GCTCCGGAGACGTACTATGAGGAGCTAAAGAGAGATTACTCGGCAAAGAA
GGCAATTTTGGTGGAGGGATTGAATGCTGTTGGTTTCAAGGTATTCCCAT
CTAGTGGGACATACTTTGTGGTTGTAGATCACACCCCATTTGGGCACGAA
ACTGATATTGCATTTTGTGAATATCTGATCAAGGAAGTTGGGGTTGTGGC
AATTCCGACCAGCGTATTTTACTTGAATCCAGAGGATGGAAAGAATTTGG
TGAGATTTACCTTCTGCAAAGATGAAGGAACTTTGAGGTCTGCAGTTGAC
AGGATGAAGGAGAAGCTGAGGAGAAAATGATCAAAGTGAGTGCTAAAGGC
TATTTTATTTGAATCAGTTGATGTAGTGGATTAAAGATTTGAGTAGTGTG
ATGTTAAGCATGTGGGGAATAATGGTAGGTACTATC
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