CX296856

Overview
NameCX296856
Unique NameCX296856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_PORPU (Cell division protease ftsH homolog OS=Porphyra purpurea GN=ftsH PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 7.996e-66
Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL TEMDGF GN+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PD  GR+ IL+VH++ K +   V  E I+RRTPGF+GADL NL+NEAAIL ARR    ++  EI  +++R++AG E    ++  + K+L+AYHE GHA++G+L+  +DPV K+++IPRGQA GLT+F PS+++    L SRS +  ++  ALGGR AEE+IFG+
Sbjct:  292 REQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLE-GTPLIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEIIFGD 502          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 7.996e-66
Identity = 123/215 (57.21%), Postives = 165/215 (76.74%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL TEMDGF GN+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PD  GR+ IL+VH++ K +   V  E I+RRTPGF+GADL NL+NEAAIL ARR    ++  EI  +++R++AG E    ++  + K+L+AYHE GHA++G+L+  +DPV K+++IPRGQA GLT+F PS+++    L SRS +  ++  ALGGR AEE+IFG+
Sbjct:  292 REQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSEIDTSIDRVVAGME-GTPLIDSKSKRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDDQ---SLISRSQILARIVGALGGRAAEEIIFGD 502          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.039e-65
Identity = 119/215 (55.35%), Postives = 164/215 (76.28%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGFS N G+I++AATNR D+LD ALLRPGRFDRQ+TVDRPDV GR  +L+VH+R K L + V+ + I+ RTPGF+GADL+NL+NEAA++AAR++ K+I   +I +A +R+IAGP KK+ V+S +++ +VAYHE GH ++G ++ E D V K++I+PRGQAGG     P E+R      ++  L +++   LGGRVAEE+IFGE
Sbjct:  280 REQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAGGYAVMLPREDRY---FQTKPELLDKIVGLLGGRVAEEIIFGE 491          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.039e-65
Identity = 131/216 (60.65%), Postives = 159/216 (73.61%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL TEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR +IL+VH   K    DV  E I+ RTPGF+GADL NL+NEAAILA RR    IS  EI D+++RI+AG E    V++D K K LVAYHE GHA+ G L P +DPV K+++IPRGQA GLT+F P +   +  L SR  L  ++   LGGR AEE+IFGE
Sbjct:  333 REQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARGLTWFIPMD---DPTLISRQQLFARIVGGLGGRAAEEIIFGE 543          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 6.769e-65
Identity = 124/216 (57.41%), Postives = 164/216 (75.93%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQL  EMDGF  + G+IV+AATNRPD+LD ALLRPGRFDRQ+ + +PDV GR +IL+VH+R K LAKDVD E ++R TPGFTGADL+NL+NEAA+LAAR+  +EI+ +EI +AL+RI  G E+K   +S ++K+ +A HEAGHAL+G +  + D V KISIIPRG A G+T   P E++    +Y +  L N++ V LGGR AEEV FG++
Sbjct:  275 REQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDK---HIYDKKDLYNKILVLLGGRAAEEVFFGKD 487          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.360e-64
Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R   LA D+D   I+R TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+++ V+++ +K+  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P  + + +   SR  LE+Q++   GGR+AEE+I+G E
Sbjct:  271 REQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGPE 483          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.360e-64
Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R   LA D+D   I+R TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+++ V+++ +K+  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P  + + +   SR  LE+Q++   GGR+AEE+I+G E
Sbjct:  271 REQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGPE 483          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.360e-64
Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R   LA D+D   I+R TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+++ V+++ +K+  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P  + + +   SR  LE+Q++   GGR+AEE+I+G E
Sbjct:  271 REQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGPE 483          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.360e-64
Identity = 132/216 (61.11%), Postives = 158/216 (73.15%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL TEMDGF GN+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR  IL+VHS  K     V  E I+ RTPGF+GADL NL+NEAAILA RR    IS  EI D+++RI+AG E    V++D K K LVAYHE GHA+ G L P +D V K+++IPRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEEVIFGE
Sbjct:  339 REQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGE 549          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.388e-64
Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R   LA D+D   I+R TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+++ V+++ +K+  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P  + + +   SR  LE+Q++   GGR+AEE+I+G E
Sbjct:  271 REQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGVE 483          
The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
FTSH_PORPU7.996e-6657.21Cell division protease ftsH homolog OS=Porphyra pu... [more]
FSTH_PORYE7.996e-6657.21Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH_BACSU3.039e-6555.35Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH2_ORYSJ3.039e-6560.65Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_AQUAE6.769e-6557.41Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_SHIFL3.360e-6456.02Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_ECOLI3.360e-6456.02Cell division protease ftsH OS=Escherichia coli (s... [more]
FTSH_ECO573.360e-6456.02Cell division protease ftsH OS=Escherichia coli O1... [more]
FTSH8_ARATH3.360e-6461.11Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH_SALTY4.388e-6456.02Cell division protease ftsH OS=Salmonella typhimur... [more]

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Properties
Property NameValue
Genbank descriptionC05803E12SK FerrChloL1 Citrus clementina cDNA clone C05803E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bp
AAAGAGAGCAGACTATTAATCAGCTTTTCACTGAAATGGATGGCTTTTCT
GGTAATTCTGGTGTTATTGTATTGGCTGCTACTAATAGGCCGGATGTTCT
TGATTCTGCTTTGTTGAGGCCTGGGAGATTTGACAGGCAGGTTACAGTGG
ATAGGCCTGATGTTGCTGGTAGGGTTAAAATTCTTCAGGTGCACTCCAGA
GGAAAGGCACTTGCTAAGGATGTGGACTTTGAAAAAATTTCTAGAAGAAC
ACCAGGTTTTACTGGAGCTGATCTGCAGAACCTGATGAATGAAGCAGCCA
TTCTTGCAGCCAGGCGTGACCTCAAGGAGATAAGCAAAGATGAGATATCC
GATGCTCTAGAGAGGATCATTGCTGGACCAGAGAAGAAAAATGCAGTTGT
CTCTGATGAGAAGAAGAAATTAGTAGCCTACCACGAGGCTGGCCATGCTT
TAGTTGGGGCTCTCATGCCTGAATATGATCCTGTAGCCAAGATTTCCATC
ATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCCAAGTGAAGA
GAGGCTTGAGTCTGGACTTTACAGCAGGAGCTACCTGGAGAATCAGATGG
CTGTCGCACTTGGTGGAAGGGTTGCAGAAGAAGTCATTTTTGGCGAGGAA
A
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