CX296856

Overview
NameCX296856
Unique NameCX296856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.388e-64
Identity = 121/216 (56.02%), Postives = 163/216 (75.46%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF GN G+IV+AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R   LA D+D   I+R TPGF+GADL NL+NEAA+ AAR + + +S  E   A ++I+ G E+++ V+++ +K+  AYHEAGHA++G L+PE+DPV K++IIPRG+A G+TFF P  + + +   SR  LE+Q++   GGR+AEE+I+G E
Sbjct:  271 REQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISA---SRQKLESQISTLYGGRLAEEIIYGVE 483          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.388e-64
Identity = 125/215 (58.14%), Postives = 160/215 (74.42%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQ+ TEMDGF+GN+GVIV+AATNRP++LDSALLRPGRFDRQV+V  PD+ GR +IL+VHSR K L KDV    I+ RTPGF+GADL NLMNEAAILA RR   +I+  EI D+++RI+AG E    ++  + K +VAYHE GHA+   L   +DPV K++++PRGQA GLT+F P E   +  L S+  L  ++   LGGR AE+VIFGE
Sbjct:  343 REQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDKITLTEIDDSIDRIVAGME-GTKMIDGKSKAIVAYHEVGHAICATLTEGHDPVQKVTLVPRGQARGLTWFLPGE---DPTLVSKQQLFARIVGGLGGRAAEDVIFGE 553          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 7.484e-64
Identity = 127/215 (59.07%), Postives = 165/215 (76.74%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSG-NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641
            REQT+NQL TEMDGFS   + VIVLAATNRP+ LD ALLRPGRFDRQV VDRPD+AGR+KIL+++++   L K+V+ + I+ RTPGF GADL NL+NEAA+LAAR     +++ +  +A+ER++AG EKK+ V+SD++KK+VAYHE GHALVGA+MP    VAKISI+PRG A  G T   P+E+R    L + S L +Q+A  LGGR AEE++F
Sbjct:  294 REQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGLEKKSRVLSDKEKKIVAYHEVGHALVGAVMPGGGQVAKISIVPRGMAALGYTLQMPTEDRF---LLNESELRDQIATLLGGRAAEEIVF 505          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 7.484e-64
Identity = 130/216 (60.19%), Postives = 159/216 (73.61%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL TEMDGF GN+GVIV+AATNR D+LDSALLRPGRFDRQV+VD PDV GR  IL+VH+  K    DV  E I+ RTPGF+GADL NL+NEAAILA RR    IS  EI D+++RI+AG E    V++D K K LVAYHE GHA+ G L P +D V K+++IPRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEE+IFG+
Sbjct:  346 REQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEIIFGD 556          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.277e-63
Identity = 120/215 (55.81%), Postives = 161/215 (74.88%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGFS N G+I++AATNR D+LD ALLRPGRFDRQ+ V+RPDV GR ++L+VH+R K L  DV+ + I+ RTPGF+GADL+NL+NEAA++AAR D  +IS   I +A++R+IAGP KK+ V+S ++KK+VA+HEAGH +VG  +   D V K++I+PRG AGG     P E+R      ++  L +++   LGGRVAEEV FGE
Sbjct:  285 REQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAGGYAVMLPKEDRY---FMTQPELLDKIIGLLGGRVAEEVTFGE 496          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.844e-63
Identity = 125/214 (58.41%), Postives = 156/214 (72.90%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQL TEMDGF GN+GVIV+AATNR DVLD+ALLRPGRFDRQ+ V  PDV  R+ IL+VH+  K L   V  E ++RRT GF GADL NL+NEAAILA RR LK+I+  EI DA++R+IAG E    ++  + K+L+AYHE GHAL   L+P + PV K+++IPR QA GLT+F    ER    L S+S L + + VALGGR AEE +FG
Sbjct:  273 REQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGME-GTPIMDGKIKRLIAYHETGHALTATLLPNHPPVQKVTLIPRRQAKGLTWFMQDNER---DLLSKSQLMSMIMVALGGRAAEEAVFG 482          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.714e-63
Identity = 118/213 (55.40%), Postives = 162/213 (76.06%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641
            REQT+NQL  EMDGF GN G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR  IL+VH++ K LA+DVD + ++++TPGF GADL+N++NEAA++AARR+   I   +I +A +R+IAGP KK+  VS ++++LVAYHEAGH +VG ++     V K++I+PRG+AGG     P E+++   L S+  ++ Q+A  +GGRVAEE+IF
Sbjct:  306 REQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM---LLSKEDMKEQLAGLMGGRVAEEIIF 515          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 3.714e-63
Identity = 118/213 (55.40%), Postives = 162/213 (76.06%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641
            REQT+NQL  EMDGF GN G+IV+AATNR DVLD ALLRPGRFDR+V V RPDV GR  IL+VH++ K LA+DVD + ++++TPGF GADL+N++NEAA++AARR+   I   +I +A +R+IAGP KK+  VS ++++LVAYHEAGH +VG ++     V K++I+PRG+AGG     P E+++   L S+  ++ Q+A  +GGRVAEE+IF
Sbjct:  306 REQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQM---LLSKEDMKEQLAGLMGGRVAEEIIF 515          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.714e-63
Identity = 118/216 (54.63%), Postives = 165/216 (76.39%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGFSGN GVIV+AATNRPDVLD AL RPGRFDRQV V  PDV GR +IL+VH R  ++A+DVD   ++R TPG++GADL NL+NEAA+ AAR + + ++  E   A ++I  GPE++  +++D++K+  AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF P  +++     S+  LE++++    GR+AE++I+GEE
Sbjct:   16 REQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQIS---ISQKQLESKLSTLYAGRLAEDLIYGEE 228          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.714e-63
Identity = 118/216 (54.63%), Postives = 165/216 (76.39%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGFSGN GVIV+AATNRPDVLD AL RPGRFDRQV V  PDV GR +IL+VH R  ++A+DVD   ++R TPG++GADL NL+NEAA+ AAR + + ++  E   A ++I  GPE++  +++D++K+  AYHEAGHA+VG L+PE+DPV K++IIPRG+A G+TFF P  +++     S+  LE++++    GR+AE++I+GEE
Sbjct:  270 REQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQIS---ISQKQLESKLSTLYAGRLAEDLIYGEE 482          
The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
FTSH_SALTI4.388e-6456.02Cell division protease ftsH OS=Salmonella typhi GN... [more]
FTSH6_ARATH4.388e-6458.14Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH3_SYNY37.484e-6459.07Cell division protease ftsH homolog 3 OS=Synechocy... [more]
FTSH2_ARATH7.484e-6460.19Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_BACPF1.277e-6355.81Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_CYAME2.844e-6358.41Cell division protease ftsH homolog OS=Cyanidiosch... [more]
FTSH_STRR63.714e-6355.40Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN3.714e-6355.40Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH2_HAEIN3.714e-6354.63Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN3.714e-6354.63Cell division protease ftsH homolog 1 OS=Haemophil... [more]

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Properties
Property NameValue
Genbank descriptionC05803E12SK FerrChloL1 Citrus clementina cDNA clone C05803E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bp
AAAGAGAGCAGACTATTAATCAGCTTTTCACTGAAATGGATGGCTTTTCT
GGTAATTCTGGTGTTATTGTATTGGCTGCTACTAATAGGCCGGATGTTCT
TGATTCTGCTTTGTTGAGGCCTGGGAGATTTGACAGGCAGGTTACAGTGG
ATAGGCCTGATGTTGCTGGTAGGGTTAAAATTCTTCAGGTGCACTCCAGA
GGAAAGGCACTTGCTAAGGATGTGGACTTTGAAAAAATTTCTAGAAGAAC
ACCAGGTTTTACTGGAGCTGATCTGCAGAACCTGATGAATGAAGCAGCCA
TTCTTGCAGCCAGGCGTGACCTCAAGGAGATAAGCAAAGATGAGATATCC
GATGCTCTAGAGAGGATCATTGCTGGACCAGAGAAGAAAAATGCAGTTGT
CTCTGATGAGAAGAAGAAATTAGTAGCCTACCACGAGGCTGGCCATGCTT
TAGTTGGGGCTCTCATGCCTGAATATGATCCTGTAGCCAAGATTTCCATC
ATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCCAAGTGAAGA
GAGGCTTGAGTCTGGACTTTACAGCAGGAGCTACCTGGAGAATCAGATGG
CTGTCGCACTTGGTGGAAGGGTTGCAGAAGAAGTCATTTTTGGCGAGGAA
A
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