CX296856

Overview
NameCX296856
Unique NameCX296856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 239.58 bits (610), Expect = 1.081e-62
Identity = 119/214 (55.61%), Postives = 160/214 (74.77%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQ+  EMDGF GN G+I++AATNRPDVLD ALLRPGRFDRQV V  PD+ GR +IL+VH R   L+KDVD   I+R TPGF+GADL NL+NEAA+ AAR D + +S  E   A ++++ G E+++ V+SD +K+  AYHEAGH ++G L+P++DP  K++IIPRG+A G+TFF P  + L     SR  LE+Q++   GGR+AEE+I+G
Sbjct:  271 REQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLS---ISRQKLESQISTLYGGRLAEEIIYG 481          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62
Identity = 121/214 (56.54%), Postives = 162/214 (75.70%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQL TEMDGFSG++GVIV+AATNR DVLDSALLRPGRFDRQ+ V  P++ GR+ IL+VHS+ K + KDV  E I+RRTPGF+GADL NL+NEAAIL  RR   EI+  EI D++++IIAG E  + +     K+L+AYHEAGHA+    +P +DPV K+++IPR QA GLT+F P++++    L S+S + +++  AL GR  EE++FG
Sbjct:  290 REQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKIIAGLE-GSPLADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQF---LVSKSQILSKIIAALAGRAMEEIVFG 499          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.145e-62
Identity = 120/216 (55.56%), Postives = 160/216 (74.07%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF GN GVI++AATNRPDVLD ALLRPGRFDRQV V  PDV GR +IL+VH R   L++DVD   I+R TPGF+GADL NL+NEAA+ AAR + + +S      A ++I+ G E+++ V+SD +K+  AYHEAGH ++G L+P++DP  K++IIPRGQA G+TFF P  + L     SR  LE+Q++   GGR+AEE+I+G +
Sbjct:  271 REQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILS---ISRQKLESQISTLYGGRLAEEIIYGSQ 483          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.012e-60
Identity = 123/216 (56.94%), Postives = 158/216 (73.15%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL TEMDGF  N GVIV+ ATNR D+LD+ALLRPGRFDRQVTV+ PD  GRV IL+VH+R K L +DV   +++ RTPGF+GADL NL+NEAAILA R     I+K+E+++A +RII G     A + D K K+L+AYHE GHA+ G+++  +D V KI++ PRG A GLT+F P E++    L SRS L  ++   LGGR AE+VIFGE
Sbjct:  305 REQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGG--IAGAPMEDTKNKRLIAYHEVGHAITGSVLKSHDEVEKITLTPRGGAKGLTWFTPEEDQ---SLLSRSALLARIITTLGGRAAEQVIFGE 515          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 2.943e-60
Identity = 112/214 (52.34%), Postives = 158/214 (73.83%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQ+  EMDGF GN G+I++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR KI+QVH +   L  +VD   I+R TPGF+GADL NL+NEAA+ AAR +   +   +   A ++I  G E+++ V+++++K+  AYHEAGH +VG L+PE+DP  K++IIPRG+A G+TFF P ++ L     +++ LE+Q++   GGR+AEE+I+G
Sbjct:  271 REQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMMSDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRALGVTFFLPKDDVLS---INKNKLESQISTLYGGRLAEEIIYG 481          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.020e-60
Identity = 113/216 (52.31%), Postives = 155/216 (71.76%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650
            REQT+NQ+  EMDGF  N GV+++AATNRPDVLD+ALLRPGRFDRQ+TV  PD+ GR KILQVH +    +  +    I+R TPGF+GA+L NL+NEA ++AARR+ KE+   ++ +A ++++ G E+++ ++SDE+KKL AYHE GHALVG      DP+ K +IIPRG+A G+    P  +R       R  +E  +AVA+ GRVAEE+IFG+E
Sbjct:  274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDNALLRPGRFDRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAARRNKKEVEMHDLEEAKDKVMMGVERRSMIMSDEQKKLTAYHEGGHALVGLYCLASDPIHKATIIPRGRALGMVMRLPENDRFS---MPRDKMEADIAVAMAGRVAEEIIFGKE 486          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.563e-60
Identity = 108/215 (50.23%), Postives = 155/215 (72.09%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L+VHS+GK +A D D + +++RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +K  ++S+++KK+ AYHE GH L    MP+ +P+ K++I+ RG+ GG     P E++   GL +RS +  Q+  A+GGR AEE++F E
Sbjct:  282 REQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFRE 493          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.563e-60
Identity = 108/215 (50.23%), Postives = 155/215 (72.09%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L+VHS+GK +A D D + +++RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +K  ++S+++KK+ AYHE GH L    MP+ +P+ K++I+ RG+ GG     P E++   GL +RS +  Q+  A+GGR AEE++F E
Sbjct:  282 REQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFRE 493          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 8.563e-60
Identity = 108/215 (50.23%), Postives = 155/215 (72.09%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L+VHS+GK +A D D + +++RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +K  ++S+++KK+ AYHE GH L    MP+ +P+ K++I+ RG+ GG     P E++   GL +RS +  Q+  A+GGR AEE++F E
Sbjct:  282 REQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFRE 493          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.118e-59
Identity = 108/215 (50.23%), Postives = 155/215 (72.09%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGF   +GVI++AATNRPD+LD ALLRPGRFDRQ+ V  PD+AGR  +L+VHS+GK +A D D + +++RT G TGADL N++NEAA+L AR +   I+   + +A++R+I GP +K  ++S+++KK+ AYHE GH L    MP+ +P+ K++I+ RG+ GG     P E++   GL +RS +  Q+  A+GGR AEE++F E
Sbjct:  282 REQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFRE 493          
The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
FTSH_BUCAI1.081e-6255.61Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_CYACA3.145e-6256.54Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH_BUCAP3.145e-6255.56Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_ODOSI1.012e-6056.94Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_BUCBP2.943e-6052.34Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_RICBR5.020e-6052.31Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_MYCTU8.563e-6050.23Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCTA8.563e-6050.23Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCBO8.563e-6050.23Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCLE1.118e-5950.23Cell division protease ftsH homolog OS=Mycobacteri... [more]

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Properties
Property NameValue
Genbank descriptionC05803E12SK FerrChloL1 Citrus clementina cDNA clone C05803E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bp
AAAGAGAGCAGACTATTAATCAGCTTTTCACTGAAATGGATGGCTTTTCT
GGTAATTCTGGTGTTATTGTATTGGCTGCTACTAATAGGCCGGATGTTCT
TGATTCTGCTTTGTTGAGGCCTGGGAGATTTGACAGGCAGGTTACAGTGG
ATAGGCCTGATGTTGCTGGTAGGGTTAAAATTCTTCAGGTGCACTCCAGA
GGAAAGGCACTTGCTAAGGATGTGGACTTTGAAAAAATTTCTAGAAGAAC
ACCAGGTTTTACTGGAGCTGATCTGCAGAACCTGATGAATGAAGCAGCCA
TTCTTGCAGCCAGGCGTGACCTCAAGGAGATAAGCAAAGATGAGATATCC
GATGCTCTAGAGAGGATCATTGCTGGACCAGAGAAGAAAAATGCAGTTGT
CTCTGATGAGAAGAAGAAATTAGTAGCCTACCACGAGGCTGGCCATGCTT
TAGTTGGGGCTCTCATGCCTGAATATGATCCTGTAGCCAAGATTTCCATC
ATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCCAAGTGAAGA
GAGGCTTGAGTCTGGACTTTACAGCAGGAGCTACCTGGAGAATCAGATGG
CTGTCGCACTTGGTGGAAGGGTTGCAGAAGAAGTCATTTTTGGCGAGGAA
A
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