CX296856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11 Identity = 42/123 (34.15%), Postives = 71/123 (57.72%), Query Frame = 3 Query: 18 NQLFTEMDGFSG---NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR-DLKEISKDEISDALERIIA 374 ++ +MDG + V VLAATN P LD AL R RF++++ + PD+ R K+++ G + +++++ ++ RT GF+GAD+ +L AAI RR D K + E++ A+E + A Sbjct: 315 SEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKA 435
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: KATL1_RABIT (Katanin p60 ATPase-containing subunit A-like 1 OS=Oryctolagus cuniculus GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11 Identity = 39/117 (33.33%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 18 NQLFTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 347 ++L +MDG G + V+VLAATN P +D AL R R ++++ + P GR ++L++ R L D+ E I+ + G++GAD+ N+ +A+++A RR + +S +EI Sbjct: 330 SELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIRLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI 444
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11 Identity = 42/128 (32.81%), Postives = 73/128 (57.03%), Query Frame = 3 Query: 18 NQLFTEMDGFSGNSG--------VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--------DLKEISKDEISD 353 ++L ++DG S + V+VLAATN P +D AL R R ++++ + PD R ++ ++ R +A DV+ E ++RRT G++G DL N+ +A++ RR ++K +SKD+IS+ Sbjct: 361 SELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDDISN 486
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: KATL1_PAPAN (Katanin p60 ATPase-containing subunit A-like 1 OS=Papio anubis GN=KATNAL1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.934e-11 Identity = 38/117 (32.48%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 18 NQLFTEMDGFSG-------NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEI 347 ++L +MDG G + V+VLAATN P +D AL R R ++++ + P GR ++L+++ R L D+ E I+ + G++GAD+ N+ +A+++A RR + + +EI Sbjct: 330 SELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLGPEEI 444
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.309e-11 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVD-RPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 356 ++ + +L T+MDGF ++ V V+ ATNR D LD ALLRPGR DR++ D R I + +LA + D + + R +GA + +M EA + A R++ I + ++ +A Sbjct: 293 QRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEA 410
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.309e-11 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 320 ++ + +L +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + QV + L+ +VD E R + A++ + EA + A R++ Sbjct: 276 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 380
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11 Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 320 ++ + +L +MDGF V V+ ATNR D LD ALLRPGR DR++ PD + + QV + L +VD E R + A++ + EA + A R++ Sbjct: 281 QRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKN 385
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: ATD1B_DANRE (ATPase family AAA domain-containing protein 1-B OS=Danio rerio GN=atad1b PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11 Identity = 42/129 (32.56%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 54 NSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEA 440 N VI++ ATNRP LDSA+LR R + +++P+V R IL++ + + V+ +I+++T GF+G+DL+ + +AA+L R + + S +E R I + + A+ +K K HEA Sbjct: 232 NCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQESPEE---DFIRPIRQEDLQRAIEKMKKSKSAGVHEA 355 The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bpback to top |