CX296856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 9.170e-54 Identity = 113/217 (52.07%), Postives = 152/217 (70.05%), Query Frame = 3 Query: 3 REQTINQLFTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 REQT+NQL EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD GRV+IL+VH +G LA DV+ +++++ T G GADL N++NEAA+LA R + KE+ + + +A+ER IAG EKK+ +S ++KK+VAYHE+GHA++ + V K+SIIPRG A G T P E + L + L ++ V LGGR AE+V E Sbjct: 290 REQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAEDVFLEE 503
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.198e-53 Identity = 104/215 (48.37%), Postives = 147/215 (68.37%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 REQT+NQ+ EMDGF N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V I+R TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G +++ +S+++K+L AYHE GHALVG P P+ K +IIPRG A G+ P + +R +E+ +AV + GRVAEE+IFG+ Sbjct: 274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFGK 485
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.198e-53 Identity = 104/214 (48.60%), Postives = 146/214 (68.22%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 REQT+NQ+ EMDGF N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V I+R TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G +++ +S+++K+L AYHE GHALVG P P+ K +IIPRG A G+ P + +R +E+ +AV + GRVAEE+IFG Sbjct: 274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFG 484
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.564e-53 Identity = 104/214 (48.60%), Postives = 146/214 (68.22%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 REQT+NQ+ EMDGF N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V I+R TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G +++ +S+++K+L AYHE GHALVG P P+ K +IIPRG A G+ P + +R +E+ +AV + GRVAEE+IFG Sbjct: 274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFG 484
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.564e-53 Identity = 107/218 (49.08%), Postives = 145/218 (66.51%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 +E T+NQL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I +VH R AL KD K++ TPGF+GAD+ N+ NEAA++AAR I++ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E+ LY++ L ++M + LGGRV+EE+ FG Sbjct: 426 QENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY----LYTKEQLLDRMCMTLGGRVSEEIFFG 639
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.564e-53 Identity = 105/218 (48.17%), Postives = 147/218 (67.43%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 +E T+NQL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I +VH R L ++ +K++R+ TPGF+GAD+ N+ NEAA++AAR I++ A+ER+I G EKK V+ E+KK VAYHEAGHA+ G + DP+ K+SIIPRG+ G + P E+ LY++ L ++M + LGGRV+EE+ FG Sbjct: 427 QENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY----LYTKEQLLDRMCMTLGGRVSEEIFFG 640
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.043e-53 Identity = 104/214 (48.60%), Postives = 146/214 (68.22%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 REQT+NQ+ EMDGF N GV+++AATNRPDVLD ALLRPGRFDRQ+ V PD+ GR +IL+VH + V I+R TPGF+GA+L NL+NEAA++AAR KE+ ++ +A ++++ G +++ +S+++K+L AYHE GHALVG P P+ K +IIPRG A G+ P + +R +E+ +AV + GRVAEE+IFG Sbjct: 274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPLHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFG 484
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.324e-52 Identity = 105/219 (47.95%), Postives = 145/219 (66.21%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 +E T+NQ+ EMDGF+ ++ V+VLA TNRPD+LD AL RPGRFDRQ+ + PD+ GR I +VH R +L+KD K++ TPGFTGAD+ N+ NEAA++AAR + + A+ER+I G EKK V+ +K VAYHEAGHA+VG + DP+ K+SIIPRG+ G + P E+ LY+R L ++M + LGGRVAE++ FG+ Sbjct: 419 QENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ----FLYTREQLFDRMCMMLGGRVAEQLFFGQ 633
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.464e-51 Identity = 101/217 (46.54%), Postives = 146/217 (67.28%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 RE T+NQL EMDGF SGV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR +I +++ + L + F ++++ TPGF GAD+ N+ NEAA++AAR + +I+ A++RII G EKKN V+S +++ VAYHE+GHA+ G + +P+ K++I+PRG A G + P+E L ++ L + + LGGR AEEV+ G Sbjct: 455 RESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LMTKEQLFDMTCMTLGGRAAEEVLIG 667
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.262e-51 Identity = 103/213 (48.36%), Postives = 145/213 (68.08%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 ++T++QL EMDGF N G+IV+AATN PD+LD AL RPGRFDR + V PDV GR +IL+++ +GK +++DVD + I+R TPGF GADL NL+N AAI AA +++S +++ A +RI+ G E+K VS++ KKL AYHE+GHA+V P+ K +I+PRG A G+ PS + S+ L ++ V +GGRVAEE+IFG Sbjct: 478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETS---VSKRQLLARLDVCMGGRVAEELIFG 687 The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bpback to top |