CX296856

Overview
NameCX296856
Unique NameCX296856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 9.170e-54
Identity = 113/217 (52.07%), Postives = 152/217 (70.05%), Query Frame = 3
Query:    3 REQTINQLFTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQL  EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD  GRV+IL+VH +G  LA DV+ +++++ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG EKK+  +S ++KK+VAYHE+GHA++  +      V K+SIIPRG A  G T   P E +    L  +  L  ++ V LGGR AE+V   E
Sbjct:  290 REQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKY---LMQKHELIAEIDVLLGGRAAEDVFLEE 503          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.198e-53
Identity = 104/215 (48.37%), Postives = 147/215 (68.37%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            REQT+NQ+  EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +       V    I+R TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +++  +S+++K+L AYHE GHALVG   P   P+ K +IIPRG A G+    P  +       +R  +E+ +AV + GRVAEE+IFG+
Sbjct:  274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFGK 485          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.198e-53
Identity = 104/214 (48.60%), Postives = 146/214 (68.22%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQ+  EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +       V    I+R TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +++  +S+++K+L AYHE GHALVG   P   P+ K +IIPRG A G+    P  +       +R  +E+ +AV + GRVAEE+IFG
Sbjct:  274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFG 484          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICPR (Cell division protease ftsH homolog OS=Rickettsia prowazekii GN=ftsH PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.564e-53
Identity = 104/214 (48.60%), Postives = 146/214 (68.22%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQ+  EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +       V    I+R TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +++  +S+++K+L AYHE GHALVG   P   P+ K +IIPRG A G+    P  +       +R  +E+ +AV + GRVAEE+IFG
Sbjct:  274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFG 484          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.564e-53
Identity = 107/218 (49.08%), Postives = 145/218 (66.51%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            +E T+NQL  EMDGF+  + V++LA TNRPD+LD ALLRPGRFDRQ+ +  PD+ GR  I +VH R      AL KD    K++  TPGF+GAD+ N+ NEAA++AAR     I++     A+ER+I G EKK  V+  E+KK VAYHEAGHA+ G  +   DP+ K+SIIPRG+  G   + P E+     LY++  L ++M + LGGRV+EE+ FG
Sbjct:  426 QENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY----LYTKEQLLDRMCMTLGGRVSEEIFFG 639          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.564e-53
Identity = 105/218 (48.17%), Postives = 147/218 (67.43%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRR----TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            +E T+NQL  EMDGF+  + V++LA TNRPD+LD ALLRPGRFDRQ+ +  PD+ GR  I +VH R   L   ++ +K++R+    TPGF+GAD+ N+ NEAA++AAR     I++     A+ER+I G EKK  V+  E+KK VAYHEAGHA+ G  +   DP+ K+SIIPRG+  G   + P E+     LY++  L ++M + LGGRV+EE+ FG
Sbjct:  427 QENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQY----LYTKEQLLDRMCMTLGGRVSEEIFFG 640          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.043e-53
Identity = 104/214 (48.60%), Postives = 146/214 (68.22%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            REQT+NQ+  EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +       V    I+R TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +++  +S+++K+L AYHE GHALVG   P   P+ K +IIPRG A G+    P  +       +R  +E+ +AV + GRVAEE+IFG
Sbjct:  274 REQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPLHKATIIPRGNALGMVQRLPETDEYSQ---NREQMESSIAVYMAGRVAEEIIFG 484          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.324e-52
Identity = 105/219 (47.95%), Postives = 145/219 (66.21%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR----GKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647
            +E T+NQ+  EMDGF+ ++ V+VLA TNRPD+LD AL RPGRFDRQ+ +  PD+ GR  I +VH R      +L+KD    K++  TPGFTGAD+ N+ NEAA++AAR     + +     A+ER+I G EKK  V+   +K  VAYHEAGHA+VG  +   DP+ K+SIIPRG+  G   + P E+     LY+R  L ++M + LGGRVAE++ FG+
Sbjct:  419 QENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ----FLYTREQLFDRMCMMLGGRVAEQLFFGQ 633          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.464e-51
Identity = 101/217 (46.54%), Postives = 146/217 (67.28%), Query Frame = 3
Query:    3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            RE T+NQL  EMDGF   SGV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR +I +++ +   L  +  F  ++++  TPGF GAD+ N+ NEAA++AAR +  +I+      A++RII G EKKN V+S  +++ VAYHE+GHA+ G  +   +P+ K++I+PRG A  G   + P+E      L ++  L +   + LGGR AEEV+ G
Sbjct:  455 RESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LMTKEQLFDMTCMTLGGRAAEEVLIG 667          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.262e-51
Identity = 103/213 (48.36%), Postives = 145/213 (68.08%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644
            ++T++QL  EMDGF  N G+IV+AATN PD+LD AL RPGRFDR + V  PDV GR +IL+++ +GK +++DVD + I+R TPGF GADL NL+N AAI AA    +++S +++  A +RI+ G E+K   VS++ KKL AYHE+GHA+V        P+ K +I+PRG A G+    PS +       S+  L  ++ V +GGRVAEE+IFG
Sbjct:  478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETS---VSKRQLLARLDVCMGGRVAEELIFG 687          
The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
FTSH_HELPY9.170e-5452.07Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_RICTY1.198e-5348.37Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICCN1.198e-5348.60Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICPR1.564e-5348.60Cell division protease ftsH homolog OS=Rickettsia ... [more]
AFG32_MOUSE1.564e-5349.08AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1... [more]
AFG32_HUMAN1.564e-5348.17AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]
FTSH_RICFE2.043e-5348.60Cell division protease ftsH homolog OS=Rickettsia ... [more]
AFG31_MOUSE1.324e-5247.95AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2... [more]
FTSH8_ORYSJ1.464e-5146.54Cell division protease ftsH homolog 8, mitochondri... [more]
FTSHB_ARATH3.262e-5148.36Cell division protease ftsH homolog 11, chloroplas... [more]

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Properties
Property NameValue
Genbank descriptionC05803E12SK FerrChloL1 Citrus clementina cDNA clone C05803E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bp
AAAGAGAGCAGACTATTAATCAGCTTTTCACTGAAATGGATGGCTTTTCT
GGTAATTCTGGTGTTATTGTATTGGCTGCTACTAATAGGCCGGATGTTCT
TGATTCTGCTTTGTTGAGGCCTGGGAGATTTGACAGGCAGGTTACAGTGG
ATAGGCCTGATGTTGCTGGTAGGGTTAAAATTCTTCAGGTGCACTCCAGA
GGAAAGGCACTTGCTAAGGATGTGGACTTTGAAAAAATTTCTAGAAGAAC
ACCAGGTTTTACTGGAGCTGATCTGCAGAACCTGATGAATGAAGCAGCCA
TTCTTGCAGCCAGGCGTGACCTCAAGGAGATAAGCAAAGATGAGATATCC
GATGCTCTAGAGAGGATCATTGCTGGACCAGAGAAGAAAAATGCAGTTGT
CTCTGATGAGAAGAAGAAATTAGTAGCCTACCACGAGGCTGGCCATGCTT
TAGTTGGGGCTCTCATGCCTGAATATGATCCTGTAGCCAAGATTTCCATC
ATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCCAAGTGAAGA
GAGGCTTGAGTCTGGACTTTACAGCAGGAGCTACCTGGAGAATCAGATGG
CTGTCGCACTTGGTGGAAGGGTTGCAGAAGAAGTCATTTTTGGCGAGGAA
A
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