CX296856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.239e-50 Identity = 99/218 (45.41%), Postives = 147/218 (67.43%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 RE T+NQL EMDGF SGV+VLA TNRPD+LD ALLRPGRFDRQ+++D+PD+ GR +I +++ + L K+ F ++++ TPGF GAD+ N+ NEAA++AAR + I+ A++R+I G EKKN V+S +++ VAYHE+GHA+ G + +P+ K++I+PRG A G + P++ L ++ L + + LGGR AEEV+ G+ Sbjct: 440 RESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNL----LMTKEQLFDMTCMTLGGRAAEEVLIGK 653
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.710e-50 Identity = 97/218 (44.50%), Postives = 147/218 (67.43%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 RE T+NQL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR +I +++ + L + + ++++ TPGF GAD+ N+ NEAA++AAR + ++ A++R+I G EKKN V+S +++ VAYHE+GHA+VG + +P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G+ Sbjct: 441 RESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LMTKEQLFDMTCMTLGGRAAEQVLIGK 654
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.151e-50 Identity = 97/217 (44.70%), Postives = 145/217 (66.82%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFG 644 RE T+NQL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR +I Q++ + L + + ++++ TPGF GAD+ N+ NEAA++AAR + ++ A++R+I G EKKN V+S +++ VAYHE+GHA+ G + +P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G Sbjct: 447 RESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENL----LMTKEQLFDMTCMTLGGRAAEQVLIG 659
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.370e-49 Identity = 103/214 (48.13%), Postives = 140/214 (65.42%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 + T+NQL E+DGF N G+IV+AATN P+ LD AL+RPGRFDR + V PDV GR +IL+ H + DVD I+R TPGF+GADL NL+N AA+ AA K ++ +++ A +RI+ G E+K+AV+SDE +KL AYHE GHALV PV K +I+PRG A G+ P ++ SR + ++ V +GGRVAEE+IFG+ Sbjct: 347 KMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIHTEGAHPVHKATIVPRGMALGMVAQLPDKDETS---VSRKQMLARLDVCMGGRVAEELIFGD 557
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.790e-49 Identity = 103/214 (48.13%), Postives = 141/214 (65.89%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 + T+NQ+ E+DGF N G+IV+AATN P+ LD AL+RPGRFDR + V PDV GR +IL+ H A+DVD I+R TPGF+GADL NL+N AA+ AA K+++ ++ A +RI+ G E+K+AV+SDE +KL A+HE GHALV PV K +I+PRG A G+ P ++ SR + ++ V +GGRVAEE+IFGE Sbjct: 344 KMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQLPDKDETS---ISRKQMLARLDVCMGGRVAEELIFGE 554
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 6.801e-49 Identity = 102/216 (47.22%), Postives = 147/216 (68.06%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDV-DFE-KISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641 RE T+NQ+ EMDGF+ V+VLA TNRPD+LD ALLRPGRFDR + +D+P++ GR I VH LA ++ D + +++ TPGF+GAD+ N+ NEAA++AAR D + + A+ER+I G E+K+ ++S E+KK+VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P + L + L+++M ++LGGRV+EE+ F Sbjct: 468 RENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPG----DIFLLTEQQLKDRMTMSLGGRVSEELHF 679
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.801e-49 Identity = 109/220 (49.55%), Postives = 145/220 (65.91%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSR----GKALAKDVD--FEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641 RE T+NQL EMDGF+ + V+VLA TNRPDVLD+AL+RPGRFDR + +D PDV GR +I VH + L D++ K++ TPGFTGAD+ N NEAA++AAR + I+ A+ER+IAG EKK V+S E+K+ VAYHEAGHA+ G + DP+ K+SIIPRGQ A G + P ++ L S ++M +ALGGRV+EE+ F Sbjct: 409 REATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQY----LISEEQFRHRMIMALGGRVSEELHF 624
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.584e-48 Identity = 104/230 (45.22%), Postives = 144/230 (62.61%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKK---------------LVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 ++T++QL EMDGF N G+IV+AATN PD+LD AL RPGRFDR + V PDV GR +IL+++ + K ++ DVD I+R TPGF GADL NL+N AAI AA +++ ++ A +RII G E+K+ +SDE KK L AYHE+GHA+V P+ K +I+PRG A G+ PS++ S+ L ++ V +GGRVAEE+IFGE+ Sbjct: 444 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARSTPGFNGADLANLVNIAAIKAAVEGADKLAAAQLEFAKDRIIMGTERKSMFISDESKKACLFKLLYFILRELILTAYHESGHAIVALNTQGAHPIHKATILPRGSALGMVTQLPSQDETS---ISKKQLLARLDVCMGGRVAEELIFGED 670
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.375e-48 Identity = 114/220 (51.82%), Postives = 141/220 (64.09%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGK--ALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA----LMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641 REQT+NQL TEMDGF NS VIVL ATNR DVLD AL RPGRFDR VTV+ PD GR IL+VH K L DV+ I+ T GFTGADL NL+NEAA+LA R++ + K + A+ER IAG EKK+A + +K +VA HEAGHA+VG L+ V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV++ Sbjct: 445 REQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSE--DRYLLFIDELLGRLVTLLGGRAAEEVVY 662
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.375e-48 Identity = 101/212 (47.64%), Postives = 138/212 (65.09%), Query Frame = 3 Query: 12 TINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 T+NQL E+DGF N G+IV+AATN P LD AL+RPGRFDR + V PDV GR +IL+ H + DVD I+R TPGF+GADL NL+N AA+ AA K ++ +++ A +RI+ G E+K+AV+SDE +KL AYHE GHALV PV K +I+PRG+ G+ P ++ +SR + + V++ GRVAEE+IFG+ Sbjct: 342 TLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIHTEGARPVHKATIVPRGRTLGMVSQLPEKDETS---FSRKQMLAWLDVSMAGRVAEELIFGD 550 The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bpback to top |