CX296856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.757e-48 Identity = 113/220 (51.36%), Postives = 140/220 (63.64%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGK--ALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVG----ALMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641 REQT+NQL TEMDGF +S VIVL ATNR DVLD AL RPGRFDR VTV+ PD GR IL+VH K L DV+ I+ T GFTGADL NL+NEAA+LA R+ + K + A+ER IAG EKK A + +K +VA HEAGHA+VG +L+ V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV++ Sbjct: 449 REQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHE--DRYLLFIDELHGRLVTLLGGRAAEEVVY 666
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.519e-48 Identity = 115/219 (52.51%), Postives = 140/219 (63.93%), Query Frame = 3 Query: 3 REQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGK--ALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGA----LMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVI 638 REQT+NQL TEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V+ PD GR IL+VH K L KDVD I+ T GFTGADL NL+NEAA+LA R + + + K + A+ER IAG EKK+A + +K +VA HE GHA+VG L+P V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV+ Sbjct: 466 REQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTE--DRYLLFVDELRGRLVTLLGGRAAEEVV 682
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.188e-47 Identity = 98/214 (45.79%), Postives = 140/214 (65.42%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 QTINQL EMDGF G+IVL ATN+ +VLD ALLRPGRFD Q+ V P GR+ +L ++ + ++D EK++ T G+TGAD+QNL+N+AAI AA R+ + + DA +R+I GP K+ + D+ ++ A+HEAGHALV L + P+ K++IIPRG+AGGLT F + + +R+ L Q+ V +GGRV EE++FG + Sbjct: 285 QTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAAALRNDPFVEMHHLWDARDRLIMGPAKRRP-LDDQTNRVSAFHEAGHALVALLTADSIPLHKVTIIPRGEAGGLTSFL---QEKDISFMTRAQLLAQLDVLMGGRVGEELVFGAD 494
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 8.313e-47 Identity = 97/214 (45.33%), Postives = 141/214 (65.89%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 QTINQL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR +IL+ + K VD E I+R T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+PRG G P +R +R+ L QM V++GGRVAEE+IFG + Sbjct: 400 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTD 610
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 2.419e-46 Identity = 96/214 (44.86%), Postives = 141/214 (65.89%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 QTINQL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR +IL+ + + VD E I+R T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+PRG G P +R +R+ L QM V++GGRVAEE+IFG + Sbjct: 458 QTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNE---TRAQLLAQMDVSMGGRVAEELIFGTD 668
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.568e-45 Identity = 90/215 (41.86%), Postives = 142/215 (66.05%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 +QT+NQL E+DGFS SG+I++ ATN P+ LD AL RPGRFD+ V VD PDV GR IL+ H + LA +VD I+R TPG +GA+L NL+N+AA+ A +++ + A ++I+ G E+K V++D +K A+HEAGHA++ P+ K +I+PRG+A G+TF P ++++ ++ + ++ V +GG++AEE+I+G++ Sbjct: 398 KQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVD---ITKRECQARLDVCMGGKIAEELIYGKD 609
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.048e-45 Identity = 96/214 (44.86%), Postives = 139/214 (64.95%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 QTI QL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR +IL+ + K VD E I+R T GF+GA+L+NL+N+AA+ AA + ++ E+ + ++I+ GPE+++ + ++ K + AYHE+GHA++ + P+ K +I+PRG G P +R R+ L QM V++GGRVAEE+IFG + Sbjct: 400 QTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNE---IRAQLLAQMDVSMGGRVAEELIFGTD 610
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.264e-44 Identity = 93/215 (43.26%), Postives = 143/215 (66.51%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 QTINQL +EMDGF+ N G+IV+AATNR D LD ALLRPGRFD +VTV +PD+AGRV I + + +D + +++ + GFTGAD++N++N+AA+ AA + E++ + +A +R++ GP + + DE+ + AYHEAGH LV + P+ K++IIPRGQ+ G T P ++ + +++ + + V +GGRVAEE+IFG++ Sbjct: 320 QTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQ---LTKAQMLATLDVMMGGRVAEELIFGDD 531
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43 Identity = 95/215 (44.19%), Postives = 137/215 (63.72%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641 EQT+NQL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P + R +I + H +G L + F ++++ TPGF+GAD+ N+ NEAA+ AAR + A+ER+IAG KK+ ++S E++++VA+HE+GHALVG L+ + V K+SI PR A G + P ++ L+++ L +M +ALGGR AE + F Sbjct: 430 EQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFEYAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQY----LFTKEQLFERMCMALGGRAAEAISF 640
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.165e-42 Identity = 92/217 (42.40%), Postives = 135/217 (62.21%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 EQT+NQL EMDG VIVLA+TNR D+LD AL+RPGR DR V +D P + R +I + H + L + F ++++ TPGF+GAD+ N+ NEAA+ AAR + A+ER++AG KK+ ++S E++K+VA+HE+GHALVG ++ + V K+SI PR A G P ++ L+++ L +M +ALGGR +E + F E Sbjct: 430 EQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFEYAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQH----LFTKEQLFERMCMALGGRASEALSFNE 642 The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bpback to top |