CX296856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.060e-41 Identity = 91/218 (41.74%), Postives = 132/218 (60.55%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEE 650 QT+NQL ++DGFS N V+ + ATN P+ LD AL RPGRFDR + V PDV GR+ IL H+R L KDVD I+R T GF GADL NL+N+AA+ A++ +S ++ + +RI+ G E+K+A ++ E K + AYHE GHALV K +I+PRG + G+T P ++ ++R + V +GGR AEE+++G++ Sbjct: 385 QTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLGMTISLPD---MDKDSWTREEYLAMLDVTMGGRAAEELLYGKD 599
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.383e-40 Identity = 91/216 (42.13%), Postives = 133/216 (61.57%), Query Frame = 3 Query: 30 TEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGE 647 T +D FS VI + ATNRPD LD +R GR DR++ + PD RV+I VHS GK LA+D+DF K+ RT GF+GAD++NL+NEAAI++ R+ I + +I D L++ ++ G +K VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G + Y++ QM VA GGR AE V+FG+ Sbjct: 625 TGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD 840
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.583e-29 Identity = 79/215 (36.74%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDF--EKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 641 EQT+NQL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P + R +I + H +G L + F ++++ TPGF+G KK+ ++S E++++VA+HE+GHALVG L+ + V K+SI PR A G + P ++ L+++ L +M +ALGGR AE + F Sbjct: 430 EQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGT-------------------------------------AKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQY----LFTKEQLFERMCMALGGRAAEAISF 603
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.290e-27 Identity = 57/134 (42.54%), Postives = 88/134 (65.67%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSD 407 ++T+ QL EMDGF + ++AATNRPDVLD A+LRPGRFDR V V P + R KIL++H LA+D+DF+K+++ T G +GADL+ + EA + A RRD + + +E +A+E++ + + + S+ Sbjct: 280 QRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKVSMAADTQKMMPSN 413
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.194e-26 Identity = 60/143 (41.96%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYH 434 ++T+ QL EMDGF + V+AATNR D+LD ALLRPGRFDR + + PD GR +I ++H+R LA+DVD +K+++ T G +GAD++ + EA ++A R D ++ D+ A++R++ E++ S E K+ AYH Sbjct: 300 QRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEE----SGEFKR--AYH 436
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.090e-26 Identity = 59/128 (46.09%), Postives = 89/128 (69.53%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 389 ++T+ QL E+DGF V ++AATNRPD+LD ALLRPGRFDR + V P+ GR +IL++H+ G ALA++VD E ++R T G +GADL+ + EA + A R + E++ + DA+++I+ G EK+ Sbjct: 272 QRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM-GVEKE 398
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.074e-25 Identity = 54/121 (44.63%), Postives = 81/121 (66.94%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERI 368 ++T+ QL EMDGF + ++AATNRPDVLD A+LRPGRFDR V V P + R KIL++H LA D+DF+K+++ T G +GADL+ + EA + A R+D + ++ +A+E++ Sbjct: 280 QRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.848e-25 Identity = 67/191 (35.08%), Postives = 110/191 (57.59%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLK-----EISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLES 563 ++ +NQL TE+DG V+V+AATNRPD++D ALLRPGR DR + V PD R+ I ++H+R LA+DV+ E+++++T G+TGAD++ L EAA+LA R + E+ E+ + L+ I+G + AV + K E+ A G + + KI ++ +P++E++E+ Sbjct: 571 DKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQS-ISGTFRAAAVELNSVIKATKERESAEA--GEFSELKNAIGKI----------ISVLSPAKEKIEA 748 HSP 2 Score: 107.457 bits (267), Expect = 6.410e-23 Identity = 55/106 (51.89%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 15 INQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 332 + QL T MDG G V+V+ ATNRP+ LD AL RPGRFDR++ + PD GR +ILQ+H+R LA+DVD + ++ T GF GADL L EAA+ A RR L I Sbjct: 300 VAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.848e-25 Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAY 431 ++T+ QL EMDGF V ++ ATNRPD+LD A+LRPGRFDR + V PD GR++IL++H+R LA+DV+ E+I++ T G GA+L+ + EA + A R ++ D+ A+E+I+ EKK V + V Y Sbjct: 291 QRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIM---EKKKVKVKEPAHLDVLY 429
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.944e-25 Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDEISDALERI 368 E+ +NQL T +DG +GV+V+ ATNRPD++D ALLR GRFD+ + + PD R+ IL+VH++ LA DVD I++RT G+ GADL+NL EA + A R D +S+ DAL+ I Sbjct: 586 ERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDALKTI 708 HSP 2 Score: 94.7449 bits (234), Expect = 4.299e-19 Identity = 60/146 (41.10%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALA-----KDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE--ISDALER-IIAGPEKKNAVVSDEKKKL 422 + + QL T MDG VIV+ ATNR D +D AL RPGRFDR++ + PD GR +IL +H+R L K+ E+++ T GF GADL L+ E+A+ A RR L EI D+ ++ LE+ ++ + KNA+ S E L Sbjct: 309 RVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSL 454 The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bpback to top |