CX296856

Overview
NameCX296856
Unique NameCX296856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 8.944e-25
Identity = 58/115 (50.43%), Postives = 76/115 (66.09%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 344
            ++ + QL T MDG  G   VIV+ ATNRPD +D AL RPGRFDR++ +  PD  GR  ILQVH+R   +  DVD +K++  T G+TGADL  L  EAAI A RR  D K+++ D+
Sbjct:  330 KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQ 444          

HSP 2 Score: 109.768 bits (273), Expect = 1.292e-23
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 314
            E+ +NQL  EMDG    + V+++AATNRPD+LD ALLRPGRFDR + V  PD   R +IL+VH++   LA+DV  E I+ +  G+TGADL+ L+ EA I A R
Sbjct:  606 ERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.993e-24
Identity = 52/122 (42.62%), Postives = 86/122 (70.49%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE-ISKDEISDALERI 368
            E+ ++QL TE+DG      V+V+AATNRPD++D ALLRPGR +R + +  PD   RV+I ++H RGK LA DV+ E+++ +T G++GAD++ +  EA +LA R  +K  ++++E  +A +++
Sbjct:  574 ERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL 695          

HSP 2 Score: 111.309 bits (277), Expect = 4.439e-24
Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 3
Query:    9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 332
            + + QL   MDG      VIV+AATNRPD +D AL RPGRFDR++ +  PD  GR +IL++H+R   LA+DVD E+++  T GF GADL+ L  EAA+ A RR L EI
Sbjct:  301 RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEI 408          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.439e-24
Identity = 57/128 (44.53%), Postives = 87/128 (67.97%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 389
            ++T+ QL  E+DGF     V V+AATNR D++D A+LRPGRFDR + V  P + GR++IL +H+R   +A DVD E I++ T GF+GADL+ ++ EA   A RR  + I+ D++  A+E++ A  +K+
Sbjct:  260 QRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALDKR 387          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.439e-24
Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 3
Query:    9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 344
            + + QL T MDG  G   VIV+AATNR D +D AL RPGRFDR++ +  PD  GR +IL++H+RG  L+ DV+   ++  T GF GAD+++L  EAA+ A RR L EI  DE
Sbjct:  308 RVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDE 419          

HSP 2 Score: 107.457 bits (267), Expect = 6.410e-23
Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 320
            E+ +NQL TE+DG      V+V+AATNRPD++D AL+R GRFDR V V +P + GR +IL++H++   LA DV   +++ R  G+ G+DL N+  EAAI A R D
Sbjct:  581 ERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDD 685          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.889e-24
Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 3
Query:    9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER 365
            +T+ QL  EMDGFS    V ++ ATNR D+LD ALLRPGRFDR + +  PD+ GRV IL +H  G  + K VD   I+ RT G  GADL+++  EA + A R D + ++ ++   ++E+
Sbjct:  275 RTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.292e-23
Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 3
Query:    9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 395
            +T+ QL  EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR++IL+VH+R K   K VD   I+  T G +GADL+ +  EA + A R     +++D+   A++++I G EK+ A
Sbjct:  260 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR-KMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSEKRLA 386          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.687e-23
Identity = 54/136 (39.71%), Postives = 88/136 (64.71%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK 413
            ++T+ QL  E+DGF     V V+ ATNR D+LD A+LRPGRFDR + V  P   GR++I ++H+R   LA+DVDF++++R T G +GAD++ +  EA + A R +  +++  + + A+E+++    KK   + D K
Sbjct:  262 QRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL----KKTTPIPDLK 393          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23
Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 3
Query:    9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 386
            +T+ QL  EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR++IL+VH+R   L K VD   I+  T G +GADL+ +  EA + A R     +++++   A+++++    K
Sbjct:  262 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23
Identity = 51/130 (39.23%), Postives = 83/130 (63.85%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 395
            ++T+ ++  ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+ GR +I ++H+R     +D+ FE ++R  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K +A
Sbjct:  289 QRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418          
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23
Identity = 51/130 (39.23%), Postives = 83/130 (63.85%), Query Frame = 3
Query:    6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 395
            ++T+ ++  ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+ GR +I ++H+R     +D+ FE ++R  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K +A
Sbjct:  289 QRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418          
The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
SAV_SULAC8.944e-2550.43Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
Y1297_ARCFU1.993e-2442.62Cell division cycle protein 48 homolog AF_1297 OS=... [more]
PSMR_AERPE4.439e-2444.53Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]
CDCH_HALSA4.439e-2450.00Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
PSMR_METPE9.889e-2444.54Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR_PYRKO1.292e-2347.29Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_ARCFU1.687e-2339.71Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_PYRHO2.877e-2344.44Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PRS7_SPIOL2.877e-2339.2326S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ2.877e-2339.2326S protease regulatory subunit 7 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC05803E12SK FerrChloL1 Citrus clementina cDNA clone C05803E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bp
AAAGAGAGCAGACTATTAATCAGCTTTTCACTGAAATGGATGGCTTTTCT
GGTAATTCTGGTGTTATTGTATTGGCTGCTACTAATAGGCCGGATGTTCT
TGATTCTGCTTTGTTGAGGCCTGGGAGATTTGACAGGCAGGTTACAGTGG
ATAGGCCTGATGTTGCTGGTAGGGTTAAAATTCTTCAGGTGCACTCCAGA
GGAAAGGCACTTGCTAAGGATGTGGACTTTGAAAAAATTTCTAGAAGAAC
ACCAGGTTTTACTGGAGCTGATCTGCAGAACCTGATGAATGAAGCAGCCA
TTCTTGCAGCCAGGCGTGACCTCAAGGAGATAAGCAAAGATGAGATATCC
GATGCTCTAGAGAGGATCATTGCTGGACCAGAGAAGAAAAATGCAGTTGT
CTCTGATGAGAAGAAGAAATTAGTAGCCTACCACGAGGCTGGCCATGCTT
TAGTTGGGGCTCTCATGCCTGAATATGATCCTGTAGCCAAGATTTCCATC
ATTCCTCGTGGCCAAGCTGGTGGGCTTACCTTTTTCGCTCCAAGTGAAGA
GAGGCTTGAGTCTGGACTTTACAGCAGGAGCTACCTGGAGAATCAGATGG
CTGTCGCACTTGGTGGAAGGGTTGCAGAAGAAGTCATTTTTGGCGAGGAA
A
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