CX296856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 8.944e-25 Identity = 58/115 (50.43%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARR--DLKEISKDE 344 ++ + QL T MDG G VIV+ ATNRPD +D AL RPGRFDR++ + PD GR ILQVH+R + DVD +K++ T G+TGADL L EAAI A RR D K+++ D+ Sbjct: 330 KRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQ 444 HSP 2 Score: 109.768 bits (273), Expect = 1.292e-23 Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAAR 314 E+ +NQL EMDG + V+++AATNRPD+LD ALLRPGRFDR + V PD R +IL+VH++ LA+DV E I+ + G+TGADL+ L+ EA I A R Sbjct: 606 ERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR 708
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.993e-24 Identity = 52/122 (42.62%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKE-ISKDEISDALERI 368 E+ ++QL TE+DG V+V+AATNRPD++D ALLRPGR +R + + PD RV+I ++H RGK LA DV+ E+++ +T G++GAD++ + EA +LA R +K ++++E +A +++ Sbjct: 574 ERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKL 695 HSP 2 Score: 111.309 bits (277), Expect = 4.439e-24 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEI 332 + + QL MDG VIV+AATNRPD +D AL RPGRFDR++ + PD GR +IL++H+R LA+DVD E+++ T GF GADL+ L EAA+ A RR L EI Sbjct: 301 RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEI 408
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.439e-24 Identity = 57/128 (44.53%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKK 389 ++T+ QL E+DGF V V+AATNR D++D A+LRPGRFDR + V P + GR++IL +H+R +A DVD E I++ T GF+GADL+ ++ EA A RR + I+ D++ A+E++ A +K+ Sbjct: 260 QRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKAALDKR 387
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.439e-24 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDE 344 + + QL T MDG G VIV+AATNR D +D AL RPGRFDR++ + PD GR +IL++H+RG L+ DV+ ++ T GF GAD+++L EAA+ A RR L EI DE Sbjct: 308 RVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDE 419 HSP 2 Score: 107.457 bits (267), Expect = 6.410e-23 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRD 320 E+ +NQL TE+DG V+V+AATNRPD++D AL+R GRFDR V V +P + GR +IL++H++ LA DV +++ R G+ G+DL N+ EAAI A R D Sbjct: 581 ERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDD 685
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.889e-24 Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER 365 +T+ QL EMDGFS V ++ ATNR D+LD ALLRPGRFDR + + PD+ GRV IL +H G + K VD I+ RT G GADL+++ EA + A R D + ++ ++ ++E+ Sbjct: 275 RTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.292e-23 Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 395 +T+ QL EMDGF V V+AATNRPD+LD ALLRPGRFDR + V PD GR++IL+VH+R K K VD I+ T G +GADL+ + EA + A R +++D+ A++++I G EK+ A Sbjct: 260 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR-KMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSEKRLA 386
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.687e-23 Identity = 54/136 (39.71%), Postives = 88/136 (64.71%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEK 413 ++T+ QL E+DGF V V+ ATNR D+LD A+LRPGRFDR + V P GR++I ++H+R LA+DVDF++++R T G +GAD++ + EA + A R + +++ + + A+E+++ KK + D K Sbjct: 262 QRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVL----KKTTPIPDLK 393
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 9 QTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 386 +T+ QL EMDGF V V+AATNRPD+LD ALLRPGRFDR + V PD GR++IL+VH+R L K VD I+ T G +GADL+ + EA + A R +++++ A+++++ K Sbjct: 262 RTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERK 386
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23 Identity = 51/130 (39.23%), Postives = 83/130 (63.85%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 395 ++T+ ++ ++DGF + VL ATNRPD LD ALLRPGR DR+V PD+ GR +I ++H+R +D+ FE ++R P TGAD++++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 289 QRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418
BLAST of CX296856 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23 Identity = 51/130 (39.23%), Postives = 83/130 (63.85%), Query Frame = 3 Query: 6 EQTINQLFTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 395 ++T+ ++ ++DGF + VL ATNRPD LD ALLRPGR DR+V PD+ GR +I ++H+R +D+ FE ++R P TGAD++++ EA + A R K +++ + DA+ ++I G +K +A Sbjct: 289 QRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418 The following BLAST results are available for this feature:
BLAST of CX296856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296856 ID=CX296856; Name=CX296856; organism=Citrus clementina; type=EST; length=651bpback to top |