CX296857

Overview
NameCX296857
Unique NameCX296857
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: YMC1_YEAST (Carrier protein YMC1, mitochondrial OS=Saccharomyces cerevisiae GN=YMC1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22
Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  218 IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALL---RSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGL 718
            + KDL +GT GG AQ++ G PFDT KV+LQ+   P          AM+ V++ +A EGPRG YKG   PL  V A  +L F V   M+       +   + L++ Q   CG   G+  SFLA P E ++ RLQ Q+   GS   G   ++ GP++  K++  ++  LRGL
Sbjct:   25 VVKDLLAGTAGGIAQVLVGQPFDTTKVRLQTSSTP--------TTAMEVVRKLLANEGPRGFYKGTLTPLIGVGACVSLQFGVNEAMKRFFHHRNADMSSTLSLPQYYACGVTGGIVNSFLASPIEHVRIRLQTQT---GS---GTNAEFKGPLECIKKLRHNKALLRGL 180          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: MCATL_RAT (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.452e-21
Identity = 66/168 (39.29%), Postives = 89/168 (52.98%), Query Frame = 2
Query:  218 IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQ-MEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGL 718
            +A D  +G  GG A +I GHPFDT+KV+LQ Q      + P+Y G +   +  I  E   GLYKG+G+PL  +   NAL+F V+G  + AL +  P        Q + GA AG     + CP EL K RLQ Q+A       G A  Y G +D   ++ R E GLRG+
Sbjct:    1 MALDFLAGCAGGVAGVIVGHPFDTVKVRLQVQNT----EKPQYRGTLHCFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGQDSP------LNQFLAGAAAGAIQCVICCPMELAKTRLQLQAA-------GPARAYKGSLDCLVQIYRHE-GLRGI 150          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: MCFD_DICDI (Mitochondrial substrate carrier family protein D OS=Dictyostelium discoideum GN=mcfD PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21
Identity = 55/180 (30.56%), Postives = 100/180 (55.56%), Query Frame = 2
Query:  200 SALMGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALL----RSQPGAPLTV--NQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLF 721
            + ++  + KD  +G+VGG + ++ GHPFDTIKV LQ       G  PK+     A+K  +  +G +G+Y+G+  PL +V+  N++ F      ++      + + G  + +  ++    GA AG  +S L  P +L+K +LQ Q    GS    V+++Y GP+DV ++ ++ + G++G+F
Sbjct:   13 AGILNSVGKDFVAGSVGGMSSIMAGHPFDTIKVMLQD----ASGNLPKFKNGFQALKYIMKVDGIKGIYRGLSVPLFSVSFTNSVFFATNNFCQSYFHPPCKDENGEDILIPYHKAAAAGAIAGGVISLLITPRDLVKSKLQVQCRPFGS--TNVSLQYKGPIDVIRQTIKRD-GIKGMF 185          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: MCATL_MOUSE (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Mus musculus GN=Slc25a29 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.519e-21
Identity = 65/168 (38.69%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  218 IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQ-MEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGL 718
            +A D  +G  GG A +I GHPFD +KV+LQ Q      + P+Y G +   +  I  E   GLYKG+G+PL  +   NAL+F V+G  + AL +  P        Q + GA AG     + CP EL K RLQ Q+       VG A  Y G +D   ++ R E GLRG+
Sbjct:    1 MALDFLAGCAGGVAGVIVGHPFDIVKVRLQVQST----EKPQYRGTLHCFQSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGQDSP------LNQFLAGAAAGAIQCVICCPMELAKTRLQLQA-------VGPARTYKGSLDCLVQIYRHE-GLRGI 150          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: MCATL_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.208e-21
Identity = 65/168 (38.69%), Postives = 86/168 (51.19%), Query Frame = 2
Query:  218 IAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQ-MEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGL 718
            +A D  +G  GG A ++ GHPFDT+KV+LQ Q      + P+Y G +   K  I  E   GLYKG+G+PL  +   NAL+F V+G  + AL    P        Q + GA AG     + CP EL K RLQ Q A       G A  Y G +D   ++   E GLRG+
Sbjct:    1 MALDFLAGCAGGVAGVLVGHPFDTVKVRLQVQSV----EKPQYRGTLHCFKSIIKQESVLGLYKGLGSPLMGLTFINALVFGVQGNTLRALGHDSP------LNQFLAGAAAGAIQCVICCPMELAKTRLQLQDA-------GPARTYKGSLDCLAQIYGHE-GLRGV 150          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19
Identity = 54/166 (32.53%), Postives = 88/166 (53.01%), Query Frame = 2
Query:  224 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLF 721
            ++   G   GAA  + GHPFDT+KV+LQ++     G   ++ G       TI  EG   LYKG+  PL  ++  N+ +F     +++ + +    P+++ + ++ GA  G  VSF+ACP E +K +LQ Q         GV + Y GP+D  K++     G+RGL+
Sbjct:   12 RNFIGGFASGAASTLAGHPFDTLKVRLQTE-----GSTGRFRGLAHCFTTTIKEEGFFALYKGVTPPLLGMSIINSCMFGAMNIVKSKIHTDKSTPISLGEIMVSGAITGWIVSFVACPIETVKSKLQVQ-------YTGVKL-YNGPIDCIKKI-----GIRGLY 159          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: ARG13_NEUCR (Amino-acid transporter arg-13 OS=Neurospora crassa GN=arg-13 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 61/170 (35.88%), Postives = 89/170 (52.35%), Query Frame = 2
Query:  224 KDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAP----LTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGLF 721
            +D+  G+  G       +PFDT+KV+LQSQP  LP    +Y G +D  +Q+I A+G  GLY+G+ APL   A  N+ LF       +LL S   AP    L+++     G  +G   S +  P EL+KC++Q      G+G     +K   P+ V K + R E GLRG +
Sbjct:   44 EDIVYGSAAGIVGKYIEYPFDTVKVRLQSQPDHLP---LRYTGPLDCFRQSIRADGFLGLYRGISAPLVGAALENSSLFFFERIGRSLLYSSGFAPRDSELSLSALWFTGGFSGAFTSLILTPVELVKCKIQVPDEPGGAGARQRQLK---PIPVIKEIFRHE-GLRGFW 206          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: YD1K_SCHPO (Uncharacterized mitochondrial carrier C4G9.20c OS=Schizosaccharomyces pombe GN=SPAC4G9.20c PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 62/171 (36.26%), Postives = 87/171 (50.88%), Query Frame = 2
Query:  206 LMGDIAKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPGAPLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGLRGL 718
            L+    KD  +G  GG AQ++ G PFD +KV+LQSQ        P Y  A+D VK+    EG    YKG   PL  +    ++ FT     +    S+ G P+T+ Q  + GA +G+A SFL  P E ++ RLQ Q+        G  V Y GP D  K++  S+ GL G+
Sbjct:   13 LVFSFTKDFLAGVSGGVAQVLVGQPFDCVKVRLQSQ----SNVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFF-SRDGTPVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQT--------GKNVLYHGPWDCIKKI-SSQYGLSGI 169          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: ORNT2_HUMAN (Mitochondrial ornithine transporter 2 OS=Homo sapiens GN=SLC25A2 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 61/167 (36.53%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  221 AKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPG----APLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGL 709
            A DL +G  GG A ++ G PFDTIKVK+Q+        P  Y G  D   +T A  G RG YKG G  L    A N++LF   G  +  +R   G    A L+  Q    G+ A    +   CPTEL+KCRLQ    +  SG+  +A  +     V K +L+ +G L
Sbjct:   10 AIDLTAGAAGGTACVLTGQPFDTIKVKMQT-------FPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSGK--IAKSHNTIWSVVKGILKKDGPL 167          
BLAST of CX296857 vs. ExPASy Swiss-Prot
Match: ORNT1_HUMAN (Mitochondrial ornithine transporter 1 OS=Homo sapiens GN=SLC25A15 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 59/167 (35.33%), Postives = 82/167 (49.10%), Query Frame = 2
Query:  221 AKDLFSGTVGGAAQLICGHPFDTIKVKLQSQPAPLPGQPPKYAGAMDAVKQTIAAEGPRGLYKGMGAPLATVAAFNALLFTVRGQMEALLRSQPG----APLTVNQQIICGAGAGVAVSFLACPTELIKCRLQAQSALAGSGQVGVAVKYGGPVDVAKRVLRSEGGL 709
            A DL +G  GG A ++ G PFDT+KVK+Q+        P  Y G  D   +T +  G RG YKG    L    A N++LF   G  + ++R   G    A L+  Q    G+ A    + + CPTEL+KCRLQ    +  SG+  +A        V K +LR +G L
Sbjct:   10 AIDLTAGAAGGTACVLTGQPFDTMKVKMQT-------FPDLYRGLTDCCLKTYSQVGFRGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKLSDLQNAAAGSFASAFAALVLCPTELVKCRLQTMYEMETSGK--IAKSQNTVWSVIKSILRKDGPL 167          
The following BLAST results are available for this feature:
BLAST of CX296857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
YMC1_YEAST8.515e-2237.65Carrier protein YMC1, mitochondrial OS=Saccharomyc... [more]
MCATL_RAT1.452e-2139.29Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCFD_DICDI4.226e-2130.56Mitochondrial substrate carrier family protein D O... [more]
MCATL_MOUSE5.519e-2138.69Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCATL_HUMAN7.208e-2138.69Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCFL_DICDI3.955e-1932.53Mitochondrial substrate carrier family protein L O... [more]
ARG13_NEUCR1.151e-1835.88Amino-acid transporter arg-13 OS=Neurospora crassa... [more]
YD1K_SCHPO4.373e-1836.26Uncharacterized mitochondrial carrier C4G9.20c OS=... [more]
ORNT2_HUMAN4.373e-1836.53Mitochondrial ornithine transporter 2 OS=Homo sapi... [more]
ORNT1_HUMAN6.314e-1735.33Mitochondrial ornithine transporter 1 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionC05803F01SK FerrChloL1 Citrus clementina cDNA clone C05803F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296857 ID=CX296857; Name=CX296857; organism=Citrus clementina; type=EST; length=721bp
CATTAAAAAGTAAACCCGAAGAAAAAATCAGAAAAATAAAACCCAGTTCC
TTTTTCCTGGCGTTTTTTTAATTTGTATACCCTCCTTTTAATCTAATACT
TTGTGTTTTCTCAAATTGAATCATTTGAGGGAAACAACTTTTCTCCACTA
GATTCGGTTGCCGTTCTCGGGGCTCTGCTTACTCCGGTGTCAGTGAGAAT
CGGCTCTGATGGGAGACATAGCCAAGGATCTATTTTCTGGGACTGTTGGA
GGGGCAGCACAATTAATATGTGGGCACCCATTTGATACCATCAAGGTCAA
GCTTCAAAGCCAGCCTGCTCCACTCCCTGGCCAACCTCCCAAGTATGCTG
GTGCCATGGATGCTGTCAAGCAAACCATAGCTGCCGAAGGGCCAAGGGGC
TTGTACAAAGGTATGGGAGCTCCACTAGCTACTGTTGCCGCTTTTAATGC
CCTCCTATTTACAGTGAGAGGACAAATGGAGGCACTGCTCAGATCTCAAC
CTGGTGCCCCACTAACCGTCAACCAGCAGATTATTTGCGGGGCTGGGGCT
GGTGTTGCTGTTTCTTTTCTTGCTTGCCCCACAGAATTGATCAAATGCAG
GTTGCAAGCCCAAAGTGCATTAGCAGGTTCTGGCCAAGTTGGTGTGGCAG
TGAAGTATGGTGGACCAGTGGATGTGGCTAAGCGTGTTCTTAGATCAGAA
GGCGGTCTTAGGGGTCTCTTC
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