CX296862

Overview
NameCX296862
Unique NameCX296862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296862_ssr134 microsatellite CX296862_ssr134:134..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.102e-46
Identity = 90/180 (50.00%), Postives = 127/180 (70.56%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIG-NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            +PR+MKK Q EIR  +G NK R+TE D+++++YL +VIKE+ RLHPPAPLL+ R+T+   ++ GY I     +++N +AIGRD K W +PEEF PERF++  ++ KGQ +E LPFG+GRR CPG+ LG+ + EL L N+LY FDW LP+G     ++M  + A    L ++KK PL LVP
Sbjct:  320 HPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGA----LNIAKKVPLQLVP 495          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.206e-46
Identity = 93/182 (51.10%), Postives = 119/182 (65.38%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP +MKKAQ E+R     +G V E  + QL+YL+ VIKETLRLHPP PLL+ R+   + K+ GY I  K+ + VNAWAIGRD  YW  PE+F P+RF++  VD KG  FEYLPFG GRRICPGI   L   EL LA LL+ FDW      + +   +NM+E+ GV  T+ ++  L L PVN+
Sbjct:  316 NPTVMKKAQEEVRKVFNEEGNVDETKLHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDW------QSNTEKLNMKESRGV--TVRREDDLYLTPVNF 489          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.469e-46
Identity = 86/152 (56.58%), Postives = 111/152 (73.03%), Query Frame = -3
Query:  271 NPRLMKKAQAEIRNHIGNKG-RVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGRE 723
            NPR+MKK Q EIR  +G+K  R+TE D++QL Y K+++KE  RLHP APLL+ R+TL   K+ GYDI  KT I +NA+AI RD K W +P+EF P+RF+D  +D +G +FE LPFGSGRRICPG+ +G+ + EL L NLLY FDW LP   E
Sbjct:  319 NPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKEE 470          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.142e-46
Identity = 89/180 (49.44%), Postives = 124/180 (68.89%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIG-NKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            +PR+MKK + EIR  +G NK R+TE D+++++YLK+VIKET RLHPP P L+ R  +   ++ GY I     I+++ +AIGRD K W +PEEF PERF +  ++ KGQ +E LPFG+GRR CPG+ LG+ + EL L N+LY FDW LPNG     ++M  + A    LT++KK PL L+P
Sbjct:  322 HPRVMKKLREEIRATLGPNKERITEEDLEKVEYLKLVIKETFRLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGA----LTIAKKVPLELIP 497          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.328e-46
Identity = 85/152 (55.92%), Postives = 112/152 (73.68%), Query Frame = -3
Query:  271 NPRLMKKAQAEIRNHIGNKG-RVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGRE 723
            NPR+MKK Q EIR  +G+K  R+ E D++QL Y K+V+KETLRLHP  PLL+ R T+   K+ GYD+  KT I VN +A+GRD K WE+ +EF P+RF+D  VD KG+++E++PFGSGRRICPG+ +G I+ E+AL NLLY FDW L    E
Sbjct:  319 NPRVMKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLAKQEE 470          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.545e-45
Identity = 83/147 (56.46%), Postives = 110/147 (74.83%), Query Frame = -3
Query:  283 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLP 723
            +P +M+KAQ E+R  +G K +V E D+ QL YLK++IKETLRLHP APLL+ R++     + GY I  KT + +NAWAIGRD K WE+ EEF+PERF++  VD KGQDF+ +PFG+GRR CPGI  G+   E++LANLLY F+W+LP
Sbjct:  323 HPDVMEKAQQEVRRVVGKKAKVEEEDLHQLHYLKLIIKETLRLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWELP 469          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.629e-45
Identity = 90/180 (50.00%), Postives = 122/180 (67.78%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNG-REEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NPR MK  Q E+R   G+KG + E+D++++ YLK V+KE+LRLH P PLL+ R++    KV GYD+   T + +N WAIGRDS  WE  E F+PERF++  +D +G  FE +PFGSGRR CPG      + ELALA L++ FD+KLPNG R ED   ++M E +G   T+ KK PL++VP
Sbjct:  330 NPRAMKILQKEVRGVAGSKGEIEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVED---LDMSEGSG--FTIHKKFPLLVVP 504          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.046e-45
Identity = 91/180 (50.56%), Postives = 116/180 (64.44%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NPR+MKK QAEIR  I N   +T+ D++QL Y K+V+KET R+ P  P+L+ R      K+ GYD+  KT I VN WA+      W+ PE F PERFID   D KG +FE LPFGSGRR+CPG+ +GL +  L L NLLY FDWKLPNG + +   +++EE  G  L   KK PL  +PV
Sbjct:  316 NPRVMKKLQAEIREKIKNIDEITDDDVEQLDYFKLVLKETFRISPIVPVLVPRVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAE--ELSIEENYG--LICVKKLPLEAIPV 491          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.919e-44
Identity = 93/179 (51.96%), Postives = 120/179 (67.04%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            +P L+KKAQ E+R     +G+V E  I +L+YLK  I E LRLHPP PL+  R+     ++NGY I  K+ + VN +AIG DSKYW  PE F PERFID  +D KG +FE+LPFG+GRRICPGIN G+   EL LA LLY FDW LP G + +  ++++ E  GV  T+SKK  L L+P
Sbjct:  308 DPILLKKAQDEVREIFQRRGKVDETCIYELKYLKAFINEVLRLHPPGPLVF-RECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNE--DLDLTEEFGV--TVSKKEDLCLIP 481          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.919e-44
Identity = 87/182 (47.80%), Postives = 123/182 (67.58%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP++ +KAQAE+R     K  + E D+++L YLK VIKETLRLHPP+ L I R+ +    ++GY+I  KT + +N WAIGRD +YW   + FIPERF D  +D KG  FEY+PFG+GRR+CPG+  GL    L LA LLY F+W+LPN  + +  +++M+E  G  +T+++K  L L+P  Y
Sbjct:  325 NPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVIKETLRLHPPSQL-IPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPE--DLDMDEHFG--MTVARKNKLFLIPTVY 501          
The following BLAST results are available for this feature:
BLAST of CX296862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
C71BU_ARATH1.102e-4650.00Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO3.206e-4651.10Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BS_ARATH5.469e-4656.58Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH7.142e-4649.44Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71BF_ARATH9.328e-4655.92Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE3.545e-4556.46Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71A6_NEPRA4.629e-4550.00Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71B1_THLAR6.046e-4550.56Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71DB_LOTJA3.919e-4451.96Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D8_SOYBN3.919e-4447.80Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05803F07SK FerrChloL1 Citrus clementina cDNA clone C05803F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296862 ID=CX296862; Name=CX296862; organism=Citrus clementina; type=EST; length=761bp
TTTTTTTTTTACGGCGAATCCATACATAATTTAGGTGATGATAATACATT
ATCCTCAAATACATGATTACAAGTGATTACATTACAATCAACCACAACTT
GTACAGGAAGTTGAGGAAGTTACAACAGAGCAATGTTGTTGTTGTCTTTC
ATTTTTCTGATGGCTATGCTACTGGAGGTAATTGACTGGCACAAGGATAA
GAGGCGTCTTTTTAGAGAGAGTGAGAGACACACCAGTTGCCTCCTCCATG
TTCATGTTAACACAATCCTCCTCCCTTCCATTCGGCAATTTCCAATCAAA
ACAATACAAGAGATTTGCAAGCGCAAGCTCCGACATTATTAATCCCAAAT
TAATCCCAGGACAAATTCTTCGGCCGGATCCAAATGGTAAATATTCGAAA
TCTTGTCCTTTAACATCAACCGGCTTATCAATAAACCTTTCTGGGATGAA
TTCTTCAGGACTCTCCCAGTACTTTGAATCTCTTCCAATTGCCCAGGCAT
TCACTTGGATCAACGTTTTGGGATAAATGTCATAACCATTAACTTTGAAA
CGATACAGGGTATCTCTCGCAATTAATAGTGGGGCAGGAGGGTGCAGTCT
CAGAGTTTCCTTGATCACCATCTTCAGGTACTGAAGTTGATCAATATCGG
CTTCGGTAACTCTTCCTTTGTTTCCGATATGATTTCTGATTTCAGCTTGT
GCTTTTTTCATCAATCTTGGATTCTACAGAGCTCTGCCATTGCCCAATCA
CCGTAATGCGC
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