CX296862

Overview
NameCX296862
Unique NameCX296862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296862_ssr134 microsatellite CX296862_ssr134:134..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.261e-42
Identity = 91/182 (50.00%), Postives = 116/182 (63.74%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP +M KAQAE+R  +  K  V   D+ +L+Y+K V+KET+R+HPP PL I R      +VNGY I  K  I +N W++GR+  YWE PE F PERF     D  G DFE++PFG+GRRICPG+N GL   E+ LA LLY FDWKL  G +    +M+M EA G  LT  +K  L+LVP  Y
Sbjct:  317 NPAVMAKAQAEVRAALKGKTSVDVDDVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPS--DMDMSEAEG--LTGIRKNNLLLVPTLY 493          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.261e-42
Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP  M K QAE+R  +  K  V  +++ +L+YL+ V+KETLRLHPP PL I R +    +VNGY I  KT I +N WAIGRD +YWE P+ F PERF +   D  G DFE++PFG+GRRICPG++ GL   E+ LA LLY FDWKLP G  +   +++M E  G  L+  KK  + LVP  Y
Sbjct:  317 NPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFPL-IPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTD--ADLDMTETPG--LSGPKKKNVCLVPTLY 493          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.261e-42
Identity = 91/182 (50.00%), Postives = 118/182 (64.84%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP  M K QAE+R  +  K  V  +++ +L+YL+ V+KETLRLHPP PL I R +    +VNGY I  KT I +N WAIGRD +YWE P+ F PERF +   D  G DFE++PFG+GRRICPG++ GL   E+ LA LLY FDWKLP G  +   +++M E  G  L+  KK  + LVP  Y
Sbjct:  317 NPAKMAKVQAEVREALKGKTVVDLSEVQELKYLRSVLKETLRLHPPFPL-IPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTD--ADLDMTETPG--LSGPKKKNVCLVPTLY 493          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.150e-42
Identity = 88/180 (48.89%), Postives = 116/180 (64.44%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NP+ M KAQAE+   +G    V E+DI  L YL+ V+KET RLHP APLL+ R      +V G+ +   T + VN WAIGRD   WE+P +F PERF+ K +DVKG+D+E  PFG GRRICPG+ L +    L LA+LLY FDWKLPNG   +  +++M+E  G+  TL +   L  +PV
Sbjct:  330 NPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSE--DLDMDETFGI--TLHRTNTLYAIPV 505          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.791e-42
Identity = 87/179 (48.60%), Postives = 117/179 (65.36%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            +P+ M K + EI   IG   +  E DID L Y++ V+KE LRLHPP PLLI R  +   K  GYDI   T + VNAWAIGRD +YW++P EF PERF++  VDVKGQ++E +PFG+GRR+C G+ LG  M      +LL+ FDW+LP+       ++NMEE+ G+  T  KK PL ++P
Sbjct:  290 HPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPK--SINMEESMGI--TARKKQPLKVIP 464          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.172e-42
Identity = 90/182 (49.45%), Postives = 114/182 (62.64%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP +M KAQAE+R  +  K      D+ +L+Y+K V+KET+R+HPP PL I R      +VNGY I  K  I +N W++GR+  YWE PE F PERF     D  G DFE++PFG+GRRICPG+N GL   E+ LA LLY FDWKL  G      +M+M EA G  LT  +K  L+LVP  Y
Sbjct:  320 NPEVMAKAQAEVRAALKGKTDWDVDDVQELKYMKSVVKETMRMHPPIPL-IPRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPS--DMDMSEAEG--LTGIRKNNLLLVPTPY 496          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.056e-41
Identity = 91/176 (51.70%), Postives = 116/176 (65.91%), Query Frame = -3
Query:  184 MKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 711
            M KAQ+EIR  IG  G V E+DI  L YL+ ++KETLRLHP APL I R +    ++ G+ +   T + VN WAIGRD+  WE+P +F PERF+ +  DVKG+DFE +PFGSGRR+CPGI++ L    + LA+LLY FDWKL NG      N++M E  G  LTL K   L  VPV
Sbjct:  336 MVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPL-IPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPG--NIDMSETFG--LTLHKAKSLCAVPV 506          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.918e-41
Identity = 89/182 (48.90%), Postives = 113/182 (62.09%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP +M KAQAE+R  +  K      D+ +L+Y+K V+KET+R+HPP PL I R       VNGY I  K  I +N W++GR+  YWE P+ F PERF     D  G DFE++PFG+GRRICPG+N GL   E+ LA LLY FDWKL  G +    +M+M EA G  LT   K  L+LVP  Y
Sbjct:  318 NPAVMAKAQAEVRAALKEKTNWDVDDVQELKYMKSVVKETMRMHPPIPL-IPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPS--DMDMSEAEG--LTGILKNNLLLVPTPY 494          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = -3
Query:  223 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSL 723
            +P +MKK Q+E+R  + +K  +T+ DI+++ YLK V+KET+R H P PLL+ R      +V GYD+   T++ +NAWAIGRD   W+ PE+F PERF++  VD KG DFE +PFG+GRR CPG    +   E  LANL+  FDW+LP+    +C  ++M E  GV++
Sbjct:  327 HPEIMKKLQSEVRQVVKDKHNITDDDIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPH----ECRELDMSERPGVAI 489          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.433e-40
Identity = 86/195 (44.10%), Postives = 121/195 (62.05%), Query Frame = -3
Query:  187 GNGRAL*NPRLMKKAQAEIRNHIGNKG-----RVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKP----VDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 744
            G    + N  +M+K Q E+R  +G+        + E D+  + YLK  IKETLRLHPPAP L+   +    +++GY +   T + V+AWA+GRD   WE PEEF+PERF+ +P    V +KG+D  ++PFGSGRRICPG+N G    E+ LANL+Y FDW++P         ++MEE+ G  LTL +K  L+LVP
Sbjct:  344 GMAELINNRHVMEKLQTEVRTTMGSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSG----AGVSMEESFG--LTLRRKEKLLLVP 532          
The following BLAST results are available for this feature:
BLAST of CX296862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
C7D95_MENSP1.261e-4250.00Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71DI_MENSP1.261e-4250.00Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.261e-4250.00Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C76C4_ARATH2.150e-4248.89Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME4.791e-4248.60Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C71DD_MENPI8.172e-4249.45Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C76C3_ARATH4.056e-4151.70Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C71DF_MENPI6.918e-4148.90Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71A8_MENPI1.180e-4046.11Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71C2_MAIZE3.433e-4044.10Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC05803F07SK FerrChloL1 Citrus clementina cDNA clone C05803F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296862 ID=CX296862; Name=CX296862; organism=Citrus clementina; type=EST; length=761bp
TTTTTTTTTTACGGCGAATCCATACATAATTTAGGTGATGATAATACATT
ATCCTCAAATACATGATTACAAGTGATTACATTACAATCAACCACAACTT
GTACAGGAAGTTGAGGAAGTTACAACAGAGCAATGTTGTTGTTGTCTTTC
ATTTTTCTGATGGCTATGCTACTGGAGGTAATTGACTGGCACAAGGATAA
GAGGCGTCTTTTTAGAGAGAGTGAGAGACACACCAGTTGCCTCCTCCATG
TTCATGTTAACACAATCCTCCTCCCTTCCATTCGGCAATTTCCAATCAAA
ACAATACAAGAGATTTGCAAGCGCAAGCTCCGACATTATTAATCCCAAAT
TAATCCCAGGACAAATTCTTCGGCCGGATCCAAATGGTAAATATTCGAAA
TCTTGTCCTTTAACATCAACCGGCTTATCAATAAACCTTTCTGGGATGAA
TTCTTCAGGACTCTCCCAGTACTTTGAATCTCTTCCAATTGCCCAGGCAT
TCACTTGGATCAACGTTTTGGGATAAATGTCATAACCATTAACTTTGAAA
CGATACAGGGTATCTCTCGCAATTAATAGTGGGGCAGGAGGGTGCAGTCT
CAGAGTTTCCTTGATCACCATCTTCAGGTACTGAAGTTGATCAATATCGG
CTTCGGTAACTCTTCCTTTGTTTCCGATATGATTTCTGATTTCAGCTTGT
GCTTTTTTCATCAATCTTGGATTCTACAGAGCTCTGCCATTGCCCAATCA
CCGTAATGCGC
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