CX296862

Overview
NameCX296862
Unique NameCX296862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296862_ssr134 microsatellite CX296862_ssr134:134..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.704e-39
Identity = 81/179 (45.25%), Postives = 115/179 (64.25%), Query Frame = -3
Query:  187 PRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYP-KTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 720
            PR MK  Q E+R     K  +TE D+  +QYL+ VIKE+LRLHPP  LL+ R+++   K+ GY   P +T   +N WAIGRD   WE+PEEF PERF++  +D+KG  FE LPFGSGRR CPG +  + + ELALA L++ F++ LP G + +  +++M E TG++       P++  P
Sbjct:  328 PRAMKTLQNEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPE--DLDMTECTGIATRRKSPLPVVATP 504          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.225e-39
Identity = 84/178 (47.19%), Postives = 112/178 (62.92%), Query Frame = -3
Query:  199 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI---DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPL 723
            NP ++KKAQ E+   IGN  R+ E+DI  L YL+ + KET R HP  PL + R +     V+GY I   T + VN WAIGRD + WE+P EF PERF+   +  +D +G DFE +PFG+GRRIC G  +G++M E  L  L++ FDWKLP+    + + +NMEEA G  L L K  PL
Sbjct:  320 NPAILKKAQGEMDQVIGNNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPS----EVIELNMEEAFG--LALQKAVPL 491          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.475e-39
Identity = 80/179 (44.69%), Postives = 113/179 (63.13%), Query Frame = -3
Query:  184 PRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 720
            P +M KA+ E+   IG    V E D+ +L YL  ++KE LRLHPP+PLL+ R  + + +++GY I   TL+ VNAWAIGRD   W+   EF P+RF++  +DV+G DF+ +PFG+GRRICPGI L   M  + L +LL  FDWK+      D ++M  +  T    T+SK  PL +VP+
Sbjct:  313 PHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGT----TISKAKPLCVVPI 487          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.475e-39
Identity = 84/178 (47.19%), Postives = 112/178 (62.92%), Query Frame = -3
Query:  199 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI---DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPL 723
            NP ++KKAQAE+   IG   R+ E+DI  L YL+ + KET R HP  PL + R +     V+GY I   T + VN WAIGRD + WE+P EF PERF+   +  +D +G DFE +PFG+GRRIC G  +G++M E  L  L++ FDWKLP+    + + +NMEEA G  L L K  PL
Sbjct:  320 NPAILKKAQAEMDQVIGRNRRLLESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPS----EVIELNMEEAFG--LALQKAVPL 491          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.456e-39
Identity = 82/179 (45.81%), Postives = 114/179 (63.69%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NP  M K QAE+R  +  K  V  +++ +L+Y++ V+KETLRLHPP PL I R +    ++NG+ I  +T I +NAW+IGRD  YWE P+ F PERF +   D  G DFE++PFG+G+RICPG++ GL   E+ LA LLY FDWKLP G      + ++  A    L+  +K  + LVP
Sbjct:  315 NPAKMAKVQAEVREALKGKTSVDLSEMQELKYMRSVVKETLRLHPPFPL-IPRQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQG----MTDADLYVAGTPGLSGPRKKNVFLVP 488          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 86/195 (44.10%), Postives = 114/195 (58.46%), Query Frame = -3
Query:  148 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDK---PVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYLQ*HSHQKNE 723
            NP + KKAQ E+   IG   R  E+DI  L YL+ + KE  R HP  PL + R +     ++GY I   T + VN WAIGRD   WE+P EFIPERF+ +    ++ +G DFE +PFG+GRRIC G  +G++M E  L  L++ FDWKLPN    D V++NMEE  G  L L K  PL  +    L    +Q +E
Sbjct:  323 NPTIFKKAQQEMDQIIGKNRRFIESDIPNLPYLRAICKEAFRKHPSTPLNLPRVSSDACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPN----DVVDINMEETFG--LALQKAVPLEAIVTPRLSFDIYQSSE 511          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.460e-38
Identity = 84/183 (45.90%), Postives = 111/183 (60.66%), Query Frame = -3
Query:  178 NPRLMKKAQAEIRNHIGNKG-RVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 723
            NP +M K QAE+R    NK  +  E  ID L+Y+KMVIKET+RL+P  PLL+         + GY++   T + +N+WA+ R  +YW+  EEF PERF D   D KG  FEYLPFG+GRR CPG   G+++ EL +A LLY FDW LP G + D V+M+      V+ T  +K  L LV   Y
Sbjct:  347 NPEVMAKVQAEVRRVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDMDFV----VTATTRRKNHLQLVASPY 525          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.197e-38
Identity = 88/188 (46.81%), Postives = 119/188 (63.30%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFID---KPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVN--MNMEEATGVSLTLSKKTPLILVPVNYL 723
            NP +++KA+ E+   +G    V E+DI  L YL+ +++ETLRLHP  PLL  R++  R  V GYDI  KT + VN WAIGRD  +WE+P EF PERF++     +DV+GQ +  LPFGSGRR CPG +L L +  + LA L+ CF WK+      DC N  +NMEE  G+  TL +  P+I VP+  L
Sbjct:  326 NPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLLF-RESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV------DCDNGKVNMEEKAGI--TLPRAHPIICVPIRRL 504          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.197e-38
Identity = 82/184 (44.57%), Postives = 117/184 (63.59%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPV-DVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            +P  +K+ Q E+   +G   RV E+DI++L YLK  +KETLR+HPP PLL+  +T     ++G+ I  K+ + +NA+AIGRD   W  P+ F P RF++  V D KG +FE++PFGSGRR CPG+ LGL   +LA+A++L+CF WKLP+G +   ++MN        LT  K T L  VP   L
Sbjct:  338 SPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMN----DVFGLTAPKATRLFAVPTTRL 516          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 70/157 (44.59%), Postives = 98/157 (62.42%), Query Frame = -3
Query:  253 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNM 723
            NPR+ KK Q E+   +G    + E D   L YL+ V+KE+LRLHPP PL++        K+ GYDI     + VN WA+ RD K W +P E+ PERF+++ +D+KG DF  LPFG+GRR+CPG  LG+ +    + +LL+ F+W LP G   + VNM
Sbjct:  321 NPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNM 477          
The following BLAST results are available for this feature:
BLAST of CX296862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
C71A4_SOLME1.704e-3945.25Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C75A3_PETHY2.225e-3947.19Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C76B1_HELTU6.475e-3944.697-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C75A1_PETHY6.475e-3947.19Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C7D94_MENGR8.456e-3945.81Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C75A2_SOLME1.104e-3844.10Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C99A2_ORYSJ2.460e-3845.90Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C93A3_SOYBN4.197e-3846.81Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C84A1_ARATH4.197e-3844.57Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI5.481e-3844.59Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]

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Properties
Property NameValue
Genbank descriptionC05803F07SK FerrChloL1 Citrus clementina cDNA clone C05803F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296862 ID=CX296862; Name=CX296862; organism=Citrus clementina; type=EST; length=761bp
TTTTTTTTTTACGGCGAATCCATACATAATTTAGGTGATGATAATACATT
ATCCTCAAATACATGATTACAAGTGATTACATTACAATCAACCACAACTT
GTACAGGAAGTTGAGGAAGTTACAACAGAGCAATGTTGTTGTTGTCTTTC
ATTTTTCTGATGGCTATGCTACTGGAGGTAATTGACTGGCACAAGGATAA
GAGGCGTCTTTTTAGAGAGAGTGAGAGACACACCAGTTGCCTCCTCCATG
TTCATGTTAACACAATCCTCCTCCCTTCCATTCGGCAATTTCCAATCAAA
ACAATACAAGAGATTTGCAAGCGCAAGCTCCGACATTATTAATCCCAAAT
TAATCCCAGGACAAATTCTTCGGCCGGATCCAAATGGTAAATATTCGAAA
TCTTGTCCTTTAACATCAACCGGCTTATCAATAAACCTTTCTGGGATGAA
TTCTTCAGGACTCTCCCAGTACTTTGAATCTCTTCCAATTGCCCAGGCAT
TCACTTGGATCAACGTTTTGGGATAAATGTCATAACCATTAACTTTGAAA
CGATACAGGGTATCTCTCGCAATTAATAGTGGGGCAGGAGGGTGCAGTCT
CAGAGTTTCCTTGATCACCATCTTCAGGTACTGAAGTTGATCAATATCGG
CTTCGGTAACTCTTCCTTTGTTTCCGATATGATTTCTGATTTCAGCTTGT
GCTTTTTTCATCAATCTTGGATTCTACAGAGCTCTGCCATTGCCCAATCA
CCGTAATGCGC
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