CX296862

Overview
NameCX296862
Unique NameCX296862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296862_ssr134 microsatellite CX296862_ssr134:134..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 85/183 (46.45%), Postives = 118/183 (64.48%), Query Frame = -3
Query:  187 PRLMKKAQAEIRNHI-GNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKP----VDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 720
            P LMKK Q E+R ++   +  VTE ++  +  LK VIKETLRLHPP PLL+   +L   +V GY I   T + VNAWA+GR S YWE   EF+PERF+       VD+K  +F++L FGSGRR+CPG++      E  L+NL+Y FDW+LP G + +  +++M E  G+  T+S+K  L+LVP
Sbjct:  357 PHLMKKLQEEVRRNVPAGQEMVTEDNLPGMTDLKAVIKETLRLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAE--DVDMTEVFGI--TVSRKEKLLLVP 535          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.221e-37
Identity = 83/183 (45.36%), Postives = 117/183 (63.93%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI---DKP-VDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NP+++ +AQ EI   +G    V E D+ QL YL+ ++KET RLHP  PL + R      ++NGY I   + + +N WAI RD   W  P EF PERF+   +KP VDV+G DFE +PFG+GRRIC G+NLG+ M +L +A L++ F+W L +G+  +   +NMEEA G  LTL +  PL++ P
Sbjct:  323 NPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEM--LNMEEAYG--LTLQRADPLVVHP 501          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.221e-37
Identity = 81/183 (44.26%), Postives = 119/183 (65.03%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDK---PVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NP +++KA+ EI   +GN   + E+DI  L YL+ +++ETLR+HP  PL++ R++     V GY+I  KT + VN WAIGRD  +WE+P EF PERF +     +DV+GQ + ++PFGSGRR CPG +L L +  + LA ++ CF WK  NG  +    ++MEE +G+  TL +  P+I VPV
Sbjct:  318 NPCVLEKARQEIDAVVGNSRIIEESDIVNLPYLQAIVRETLRIHPGGPLIV-RESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNK----VDMEEKSGI--TLPRAHPIICVPV 493          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.595e-37
Identity = 80/184 (43.48%), Postives = 117/184 (63.59%), Query Frame = -3
Query:  175 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 723
            +P+ + + Q E+R     K RV+E DI  ++YLK VIKE LRLHPP P++   ++    K+  Y I   T + +NAWAIGR+   W    EEF PER +D  VD +GQ+FE LPFG+GRRICP ++  ++++E+ LANL++ FDWKLP   +ED    ++ E++G S  + ++ PL  V   YL
Sbjct:  310 HPKSLNRLQEEVRTICKGKSRVSEDDIQGMKYLKAVIKEALRLHPPFPMMAPHESTEDVKLRDYHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKED--KTDVAESSGFS--VHREFPLYAVASPYL 489          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.640e-37
Identity = 83/183 (45.36%), Postives = 116/183 (63.39%), Query Frame = -3
Query:  184 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI---DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 723
            NP +++KA+ EI   +G    V E+DI  L YL+ +++ETLRLHP  PL++ R++     V GYDI  KT + VN WAIGRD  +WE P EF PERFI      +DV+GQ + ++PFGSGRR CPG +L   +  + LA ++ CF WKL  G  +    ++MEE +G+  TL +  P+I VPV
Sbjct:  325 NPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVV-RESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGK----VDMEEKSGI--TLPRANPIICVPV 500          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.640e-37
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGR-VTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKL---PNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NP  MKK Q EIR+ I   G  + E +++ ++YLK VIKE  R+HPP PL++ R      KV GYDI   T + +NAW+I RD   W    EEF PER +D  +D  GQD +Y+PFGSGRRICPGINL + + E+ LANL+  FDW +   PNG + D        A    L + +K PLI  P
Sbjct:  317 NPECMKKLQNEIRSTIRPHGSYIKEKEVENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDL-------AEDFGLDVCRKNPLIAFP 493          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.915e-37
Identity = 84/189 (44.44%), Postives = 109/189 (57.67%), Query Frame = -3
Query:  178 PRLMKKAQAEIRNHIGNKGRVT-EADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDK-------PVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 720
            P  M KAQAE+R  +  K     E  +D+L Y +MV+KE LRLHP  PLL+ R       V G+++   T + VNAWA+ R  + W  PEEF PERF D         VD +G  FEY+PFGSGRR+CPG   GL   EL +A LLY FDW LP+G   + ++M+    T V  T+ ++  L LVP  Y
Sbjct:  326 PEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMD----TVVGSTMRRRNHLHLVPSPY 510          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.915e-37
Identity = 76/179 (42.46%), Postives = 110/179 (61.45%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            +P  M K + EI   I    +  ++DI+ L Y++ V+KE+LRLHPP P LI R+T+   K  GYD+   T + VNAWAIGRD + W+ P  F PERF+   +DVKGQ +  +PFG+GRR+C G+ LG  M   AL +LL  F+W+LP+G     +NM+      + +T  K+  L ++P
Sbjct:  328 HPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMD----GSMGVTARKRDSLKVIP 502          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.303e-36
Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = -3
Query:  253 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNM 723
            NPR+ +K Q E+   IG +  +TEAD   L YL+ V KE +RLHPP PL++        KV GYDI   + + VN WA+ RD   W+ P EF PERF+++ VD+KG DF  LPFGSGRR+CPG  LG+ ++   L +LL+ F W  P G + + ++M
Sbjct:  319 NPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDM 475          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.008e-36
Identity = 86/184 (46.74%), Postives = 113/184 (61.41%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGR-VTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKL---PNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NP +MKK Q EIR+ I   G  + E D++ ++YLK VIKE  R+HPP PL++ R      KV GY+I   T + +NAWAI RD   W    EEF PER +D  +D  G+D  ++PFGSGRRICPGINL L + E+ +ANL+  FDW+    PNG + D     + EA G  L + +K PLI  P
Sbjct:  317 NPNVMKKLQDEIRSTIRPHGSYIKEKDVENMKYLKAVIKEVFRVHPPLPLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPD-----LTEAFG--LDVCRKFPLIAFP 493          
The following BLAST results are available for this feature:
BLAST of CX296862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
C71C4_MAIZE5.481e-3846.45Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
F3PH_PETHY1.221e-3745.36Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C93A2_SOYBN1.221e-3744.26Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71AP_ARATH1.595e-3743.48Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN4.640e-3745.36Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71AI_ARATH4.640e-3746.20Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI7.915e-3744.44Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C76A2_SOLME7.915e-3742.46Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C98A2_SOYBN2.303e-3645.86Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71AC_ARATH3.008e-3646.74Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05803F07SK FerrChloL1 Citrus clementina cDNA clone C05803F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296862 ID=CX296862; Name=CX296862; organism=Citrus clementina; type=EST; length=761bp
TTTTTTTTTTACGGCGAATCCATACATAATTTAGGTGATGATAATACATT
ATCCTCAAATACATGATTACAAGTGATTACATTACAATCAACCACAACTT
GTACAGGAAGTTGAGGAAGTTACAACAGAGCAATGTTGTTGTTGTCTTTC
ATTTTTCTGATGGCTATGCTACTGGAGGTAATTGACTGGCACAAGGATAA
GAGGCGTCTTTTTAGAGAGAGTGAGAGACACACCAGTTGCCTCCTCCATG
TTCATGTTAACACAATCCTCCTCCCTTCCATTCGGCAATTTCCAATCAAA
ACAATACAAGAGATTTGCAAGCGCAAGCTCCGACATTATTAATCCCAAAT
TAATCCCAGGACAAATTCTTCGGCCGGATCCAAATGGTAAATATTCGAAA
TCTTGTCCTTTAACATCAACCGGCTTATCAATAAACCTTTCTGGGATGAA
TTCTTCAGGACTCTCCCAGTACTTTGAATCTCTTCCAATTGCCCAGGCAT
TCACTTGGATCAACGTTTTGGGATAAATGTCATAACCATTAACTTTGAAA
CGATACAGGGTATCTCTCGCAATTAATAGTGGGGCAGGAGGGTGCAGTCT
CAGAGTTTCCTTGATCACCATCTTCAGGTACTGAAGTTGATCAATATCGG
CTTCGGTAACTCTTCCTTTGTTTCCGATATGATTTCTGATTTCAGCTTGT
GCTTTTTTCATCAATCTTGGATTCTACAGAGCTCTGCCATTGCCCAATCA
CCGTAATGCGC
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