CX296862

Overview
NameCX296862
Unique NameCX296862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX296862_ssr134 microsatellite CX296862_ssr134:134..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.949e-35
Identity = 80/179 (44.69%), Postives = 116/179 (64.80%), Query Frame = -3
Query:  190 PRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAP-LLIARDTLYRFKVNGYDIYP-KTLIQVNAWAIGRDSKYWESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILV 720
            PR +K  Q E+R     K  +TE D+  +QYL+ VIKE+LRLHP    LL+ R+++    + GY   P +T   +NAWAIGRD   WE+PEE+ PERF++   DVKG +F+ LPFG+GRR CPG +  + + ELALA L++ FD+ LP G + +  +++M E  G+  T  +K PL++V
Sbjct:  327 PRALKTLQDEVRGLAQGKSEITEDDLKNMQYLRAVIKESLRLHPTQESLLVPRESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPE--DLDMTETIGI--TTRRKLPLLVV 501          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.546e-35
Identity = 82/180 (45.56%), Postives = 114/180 (63.33%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NP++MKK Q EIR+       VTE + +++ YL+ VIKE LRL PPAPLL+ R      K+ GY+I   T + VNAWAI RD+  W    EEF PER +D  +D +GQDF+++PFGSG+RICPGI     +  + LAN++  F+W++    E   V  ++ EATG  L + +K PLI +P
Sbjct:  319 NPKVMKKLQEEIRSSSPQDLFVTEKEAEKMNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRM--DVEPQRVQHDLTEATG--LVVFRKFPLIAIP 494          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.343e-35
Identity = 74/183 (40.44%), Postives = 110/183 (60.11%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI----DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            N  ++ K Q E+R    +   V E D+ ++ YLK  IKE++R+HPPAP L+   + +  ++NGY I   T + VNAWA+ RD   W+  EEF PERF+    D  VD+ G+D  ++PFG+GRRIC G    +   E+ LANL+Y FDW++P   E     ++M +  G++L  ++K  L LVP
Sbjct:  346 NRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQK--LYLVP 526          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.672e-35
Identity = 76/178 (42.70%), Postives = 108/178 (60.67%), Query Frame = -3
Query:  199 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDK---PVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPL 723
            NP ++++AQ E+   IG   R  EADI +L YL+ + KE  R HP  PL + R      +VNG+ I   T + VN WAIGRD   WE+P EF P+RF+++    +D +G DFE +PFG+GRRIC G  LG+++ E  L  L++ F W+LP+      + +NM+E+ G  L L K  PL
Sbjct:  324 NPIILRRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPS----SVIELNMDESFG--LALQKAVPL 495          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.012e-34
Identity = 81/183 (44.26%), Postives = 106/183 (57.92%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFI----DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            +P +M KAQ E+   +G    V E+DI QL YL+ VIKE  RLHPP PL +        ++NGY I   + +  N WAI RD   W  P  F PERF+       VDVKG DFE +PFG+GRRIC G++LGL   +   A L+  FDW+L  G   +   +NMEE+ G  LTL +  PL++ P
Sbjct:  321 HPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPE--KLNMEESYG--LTLQRAVPLVVHP 499          

HSP 2 Score: 20.4014 bits (41), Expect = 1.012e-34
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -1
Query:  714 DWAMAELCRIQD 749
            DWA+AEL R  D
Sbjct:  312 DWAIAELIRHPD 323          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 2.155e-34
Identity = 71/164 (43.29%), Postives = 107/164 (65.24%), Query Frame = -3
Query:  223 MKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSL 711
            + + Q E+R    +K  V+E D+  ++YLK VIKETLRLHPP PL++  ++ +  K+  Y I   T + +NAWAIGR++  W    EEF PER ++  VD +GQD E +PFG+GRRICP I+  +++ E+ LANL++ FDW LP    E     ++ E+TG+++
Sbjct:  316 LDRLQEEVRMVCKDKSGVSEDDLQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTE--YQTDVAESTGMAV 477          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.155e-34
Identity = 70/165 (42.42%), Postives = 104/165 (63.03%), Query Frame = -3
Query:  229 PRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGV 720
            P  + + Q E+R        V+E DI  + YLK VIKET+RLHPP PL++  ++    ++  Y I   T + +NAWAIGR++  W    E+F PER ++  VD +G +FE +PFG+GRRICP I+  +I+ E+ LANL++ +DW+LP    ED    N+ E+TG+
Sbjct:  312 PECLNRLQEEVRTICKGNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIED--QTNVAESTGM 474          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.677e-34
Identity = 71/166 (42.77%), Postives = 104/166 (62.65%), Query Frame = -3
Query:  229 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYW-ESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGV 723
            +P  ++  Q E+R        V+E DI  + YLK VIKET RLHPP PLL   +++    +  Y I   T + +NAWAIGR++  W    E+F PER +D  VD +G +FE +PFG+GRRICP I+  +++ E+ALAN ++ +DWKLP   +E+    N+ E+TG+
Sbjct:  311 HPECLRTLQEEVRTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKEN--QTNVAESTGM 474          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.271e-34
Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = -3
Query:  187 NPRLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWE-SPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 723
            NP++MKK Q EIR+       VTE + +++ YL+ VIKE LRL PPAPL++ R       + GY+I   T + +NAWAI RD+  W    EEF PER +D  +D +GQDF+++PFGSG+RICPGI     +  + LAN++  F+W++    E   V  ++ EATG  L + +K PLI +P
Sbjct:  312 NPKVMKKLQEEIRSSSRQGLFVTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTWGIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRM--DVEPQRVQHDLTEATG--LVVFRKFPLIAIP 487          
BLAST of CX296862 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.070e-33
Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = -3
Query:  199 RLMKKAQAEIRNHIGNKGRVTEADIDQLQYLKMVIKETLRLHPPAPLLIARDTLYRFKVNGYDIYPKTLIQVNAWAIGRDSKYWESPEEFIPERFIDK---PVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPL 717
            +++ +A  E+   IG   R+ ++DI  L Y + + KET R HP  PL + R +    +V+G+ I   T + VN WAIGRD K WE+P +F PERF+ +    +D +G  FE +PFG+GRRIC G  +G    E  L  L++ FDWKLP+G     V +NMEE+ G++  L KK PL
Sbjct:  339 QILNRAHEEMDQVIGRNRRLEQSDIPNLPYFQAICKETFRKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDG----VVEVNMEESFGIA--LQKKVPL 508          
The following BLAST results are available for this feature:
BLAST of CX296862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
C71A2_SOLME1.949e-3544.69Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71AK_ARATH2.546e-3545.56Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE4.343e-3540.44Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C75A7_EUSGR5.672e-3542.70Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
F3PH_ARATH1.012e-3444.26Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71AO_ARATH2.155e-3443.29Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH2.155e-3442.42Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH3.677e-3442.77Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH6.271e-3443.89Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME1.070e-3342.05Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]

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Properties
Property NameValue
Genbank descriptionC05803F07SK FerrChloL1 Citrus clementina cDNA clone C05803F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296862 ID=CX296862; Name=CX296862; organism=Citrus clementina; type=EST; length=761bp
TTTTTTTTTTACGGCGAATCCATACATAATTTAGGTGATGATAATACATT
ATCCTCAAATACATGATTACAAGTGATTACATTACAATCAACCACAACTT
GTACAGGAAGTTGAGGAAGTTACAACAGAGCAATGTTGTTGTTGTCTTTC
ATTTTTCTGATGGCTATGCTACTGGAGGTAATTGACTGGCACAAGGATAA
GAGGCGTCTTTTTAGAGAGAGTGAGAGACACACCAGTTGCCTCCTCCATG
TTCATGTTAACACAATCCTCCTCCCTTCCATTCGGCAATTTCCAATCAAA
ACAATACAAGAGATTTGCAAGCGCAAGCTCCGACATTATTAATCCCAAAT
TAATCCCAGGACAAATTCTTCGGCCGGATCCAAATGGTAAATATTCGAAA
TCTTGTCCTTTAACATCAACCGGCTTATCAATAAACCTTTCTGGGATGAA
TTCTTCAGGACTCTCCCAGTACTTTGAATCTCTTCCAATTGCCCAGGCAT
TCACTTGGATCAACGTTTTGGGATAAATGTCATAACCATTAACTTTGAAA
CGATACAGGGTATCTCTCGCAATTAATAGTGGGGCAGGAGGGTGCAGTCT
CAGAGTTTCCTTGATCACCATCTTCAGGTACTGAAGTTGATCAATATCGG
CTTCGGTAACTCTTCCTTTGTTTCCGATATGATTTCTGATTTCAGCTTGT
GCTTTTTTCATCAATCTTGGATTCTACAGAGCTCTGCCATTGCCCAATCA
CCGTAATGCGC
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