CX296866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHOH_MOUSE (Rho-related GTP-binding protein RhoH OS=Mus musculus GN=Rhoh PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33 Identity = 68/167 (40.72%), Postives = 107/167 (64.07%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A I+ +G+ L + + A Y+ECS+ + + V+ VF+ A Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQRE-----VGPHRASCINAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECA 166
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33 Identity = 67/167 (40.12%), Postives = 108/167 (64.67%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V+++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ +G+ L + + A Y+ECS+ + + V+ VF+ A Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE-----VGPHRASCVNAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECA 166
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHO1_ENTHI (Ras-like GTP-binding protein RHO1 OS=Entamoeba histolytica GN=RHO1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33 Identity = 73/170 (42.94%), Postives = 108/170 (63.53%), Query Frame = 3 Query: 177 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 + + +K V VGDGAVGKTCLL++++ PT YVPTVF+NFS + L LWDTAGQE+Y+RLRPLSY +DV +L F++ ++ S++N+S KW PE+KH + +IL K+DLR D + ++ +G++L + +G AYIE SS + + VF+ Sbjct: 16 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILDLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKH----LYLILQRLKVDLRKDV--------SDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFE 173
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACI_DICDI (Rho-related protein racI OS=Dictyostelium discoideum GN=racI PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.997e-33 Identity = 71/170 (41.76%), Postives = 105/170 (61.76%), Query Frame = 3 Query: 189 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV--PIILVGTKLDLRDDK---QFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 +IK + +GD GKT ++++Y++ +FPT YVP+ D S ++ N ++G WD++ +++ RP +Y +V IL FS+ S S+ENVSKKWIPE++ YAP + PIIL+GTK DLR+D+ ++ PIS QG L K I A Y+ECSS Q V +F Sbjct: 5 YIKLLVLGDSKTGKTTMMMTYSTGSFPTGYVPSHVDATSLDIEYNKQVCHVGFWDSSALAEFDNTRPSTYPNTNVIILCFSIDSPTSFENVSKKWIPEIRQYAPSIHTPIILLGTKCDLREDENTINLLKENNQMPPISYKQGLALSKEIKATMYLECSSLCNQGVNEIF 174
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHOH_HUMAN (Rho-related GTP-binding protein RhoH OS=Homo sapiens GN=RHOH PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.306e-32 Identity = 67/167 (40.12%), Postives = 108/167 (64.67%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IKCV VGD AVGKT LL+ +TS TFP Y PTV++N +V ++G ++LGLWDTAG + + +RPLSY+ ADV ++ +S+ + S+ N+ KWI E++ P P+++V T+ D R+ + A ++ +G++L + + A Y+ECS+ + + V+ VF+ A Sbjct: 5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQRE-----MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECA 166
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHO3_SCHPO (GTP-binding protein rho3 OS=Schizosaccharomyces pombe GN=rho3 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.227e-32 Identity = 71/166 (42.77%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 K V +GDGA GKT LL +T FP Y PT+F+N+ ++ V+G+++ L LWDTAGQE+Y++LR LSY V ++ F++ S+ S ENV KW+PE+ PGV ++LV K DLR + +DH + I +G K I A Y+ECS+K + V F A Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGADEEQVDH--SKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEA 178
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHO2_YEAST (GTP-binding protein RHO2 OS=Saccharomyces cerevisiae GN=RHO2 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.227e-32 Identity = 75/167 (44.91%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPG-AVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 K V +GDGA GKT LL +T FP Y PTVF+N+ + V+G V+L LWDTAGQE+Y RLRP SY AD+ ++ F++ + S N KW E Y P PI+LVG K DLR + F + VPI A +++ + IGA Y+ECS+ T + V VF+ A Sbjct: 9 KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDA--KQVARAIGAKKYMECSALTGEGVDDVFEVA 173
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.556e-30 Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEE---LRKLIGAPAYIECSSKTQQNVKAVF 683 K V GDGA GKT LL +T F Y PTVF+N+ ++ ++ V L LWDTAGQE+++RLR LSY V ++ FS+ + S ENV KW+ E+ Y PGV ++LV +K DLRDD +D T Q EE + + I A Y+ECSSK + V VF Sbjct: 19 KVVVCGDGACGKTSLLNVFTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPA-VLDRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHNRGVNEVF 183
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RND3_RAT (Rho-related GTP-binding protein RhoE OS=Rattus norvegicus GN=Rnd3 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.065e-30 Identity = 70/185 (37.84%), Postives = 110/185 (59.46%), Query Frame = 3 Query: 153 LS*KKIKMSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSS-KTQQNVKAVFDAA 692 LS K I M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S QG + K IGA YIECS+ +++ +V+ +F A Sbjct: 10 LSSKSI-MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RND3_PONAB (Rho-related GTP-binding protein RhoE OS=Pongo abelii GN=RND3 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.065e-30 Identity = 70/185 (37.84%), Postives = 110/185 (59.46%), Query Frame = 3 Query: 153 LS*KKIKMSASRFIKC--VTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFID--HPGAVPISTAQGEELRKLIGAPAYIECSS-KTQQNVKAVFDAA 692 LS K I M ++ +KC V VGD GKT LL + + FP +YVPTVF+N++A+ ++ + L LWDT+G Y+ +RPLSY +D ++ F + + ++V KKW E++ + P ++LVG K DLR D ++ + P+S QG + K IGA YIECS+ +++ +V+ +F A Sbjct: 10 LSSKSI-MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVA 193 The following BLAST results are available for this feature:
BLAST of CX296866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296866 ID=CX296866; Name=CX296866; organism=Citrus clementina; type=EST; length=693bpback to top |