CX296866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQG-EELRKLIGAPAYIECSSKTQQNVKAVFDA 689 K V +G+ AVGK+ L++ + F T+ F + V ++ +TV +WDTAGQE Y+ L P+ YRGA I+ + + + ++ +K W+ EL+ A P + I L G K DL + AV AQ E L+ ++E S+KT NV +F A Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYAEDNSLL----FMETSAKTAMNVNEIFMA 177
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 48/165 (29.09%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHY-APGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K + +GD VGKTC++ + S + T+ +F+ + ++G V + +WDTAGQE + + YR A I+A+ L ++++E++ WI E++ Y A V I+L+G K DL + + + L + G A +E S+K +N++ VF Sbjct: 19 KIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESI-PHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFE----------DACTLAEKYGLLAVLETSAKESKNIEEVF 172
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 K + +GD VGK+CLL +T N F D T+ F +V VN + L +WDTAGQE + + YRGA +L + + + +Y +++ W+ + ++ P I+L+G K DL G ++ + K G ++E S+KT +NV+ F Sbjct: 10 KYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLT-TWLTDARNLTNPNTVIMLIGNKKDLE----------GQRDVTYEEASAFAKQNGL-IFVESSAKTGENVEEAF 162
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLR 542 K V +GD VGK+ LL +T N F + T+ F+ V G V +WDTAGQE Y + YRGA +L + + A++EN + +W+ EL+ H P + ++L+G K DLR Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 50/166 (30.12%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 195 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 K V +GD VGK+ LL Y N F + T+ FS + ++ + L LWDTAGQE YN + Y+GA ++ +++ + S+ N+ +KW+ + + A I+LVG K DL++ ++ +ST +G++ + +IE S+ NV+ F+ Sbjct: 13 KIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNL-EKWLKKFRENAHQDYGIMLVGNKSDLKEYRE----------VSTLEGKQFAEK-HYMQFIETSALDSNNVETAFN 166
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAPA_DISOM (Ras-related protein O-Krev OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 R K V +G G VGK+ L + + F Y PT+ D++ V V+ L + DTAG E + +R L + F L +S+ +++++ ++ ++ I +K VP+ILVG K DL D++ + QG+ L + A++E S+K++ NV +F Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQPCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TEDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 158
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 48/172 (27.91%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 174 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK-HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVF 683 M+ + K + +GD VGK+CLL+ +T F + T+ F A +V ++G + L +WDTAGQE + + YRGA +L + + + ++ +++ W+ + + H + + I+L+G K DL + + +GE + G ++E S+KT NV+ F Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLT-SWLEDARQHSSSNMVIMLIGNKSDLESRRD----------VKREEGEAFAREHGL-IFMETSAKTACNVEEAF 160
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 51/183 (27.87%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 144 KKPLS*KKIKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAP-GVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 +KP + S K + VGD AVGK+ LL+ + F + T+ F S ++ +N + L +WDTAGQE + + YRGA ++ + + + S+E+++ W+ + + ++ V +L+G K DL ++Q +ST++ +E + G + E S+KT NV F+ Sbjct: 9 EKPTFNDRKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLN-SWLTDCRKFSSCDVTTVLIGNKADLEANRQ----------VSTSEAKEFAEKNGL-MFFETSAKTALNVDEAFE 179
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAN_DICDI (GTP-binding nuclear protein Ran OS=Dictyostelium discoideum GN=ranA PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 3 Query: 174 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDK 551 M+ IK V VGDG VGKT + + + F Y+PT+ + + N ++ +WDTAGQE + LR Y + I+ F + S+ SY+NV W +L +PI+L G K+D++D K Sbjct: 1 MAEKEQIKLVLVGDGGVGKTTFVQRHLTGEFEPRYIPTLGVSVHPLIFYTNFGKIHFNVWDTAGQEKFGGLRDGYYIQGNCAIIMFDVTSRISYKNV-PNWHSDLTRVCENIPIVLCGNKVDVKDRK 126
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RABN1_DICDI (Ras-related protein RabN1 OS=Dictyostelium discoideum GN=rabN1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 53/183 (28.96%), Postives = 89/183 (48.63%), Query Frame = 3 Query: 168 IKMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL--KHYAPGV-------PIILVGTKLDL-RDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 ++ A++ +K + +GD GKT + + F P+ FD F ++++ V WDTAGQE + L YR A+ +L F + ++ S++N+ KWI EL K G+ P +L+GTK D+ R DK + + E +++I Y E S+K +N+K F+ Sbjct: 1 MEYKANKKLKIIMIGDYNSGKTAIFNEFAGRKFGIYTCPSTFDLFYKEIMIDDELVGYHFWDTAGQERFTSLNRHFYRNANCCVLCFDIHNEESFKNLD-KWITELHSKCLENGLESEKLSPPFVLIGTKSDIPRTDKSISNERIE----QWCKNIEDQRIIDKVHYFETSAKNSKNIKEPFN 178 The following BLAST results are available for this feature:
BLAST of CX296866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296866 ID=CX296866; Name=CX296866; organism=Citrus clementina; type=EST; length=693bpback to top |