CX296866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACB_ENTHI (Rho-related protein racB (Fragment) OS=Entamoeba histolytica GN=RACB PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.619e-49 Identity = 93/163 (57.06%), Postives = 121/163 (74.23%), Query Frame = 3 Query: 210 GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 G G VGKTCLL+SYT+N FPT+YVPTVFDN+SA V+V+ +NLGLWDTAGQEDY+R+RPLSY DVF+L FS++S S+EN+S KW PE+ H+ P P +L+GTK+D+RD++ PI++ QGE K IGA YIECS+ TQ+N++ VFD A Sbjct: 1 GAGGVGKTCLLVSYTTNAFPTEYVPTVFDNYSATVMVDSRPINLGLWDTAGQEDYDRIRPLSYPQTDVFLLCFSVVSPPSFENISSKWKPEVSHHCPNAPCLLIGTKIDIRDEQTQTNKTCDKKIEPITSEQGEAKCKDIGALKYIECSALTQKNLRYVFDEA 163
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHOJ_HUMAN (Rho-related GTP-binding protein RhoJ OS=Homo sapiens GN=RHOJ PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49 Identity = 92/171 (53.80%), Postives = 125/171 (73.10%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 + +KCV VGDGAVGKTCLL+SY ++ FP +YVPTVFD+++ V V G LGL+DTAGQEDYN+LRPLSY DVF++ FS+++ ASY NV ++W+PELK P VP +L+GT++DLRDD + + + P++ G +L K IGA Y+ECS+ TQ+ +KAVFD A Sbjct: 20 KMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEA 190
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: CDC42_MACFA (Cell division control protein 42 homolog OS=Macaca fascicularis GN=CDC42 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49 Identity = 92/169 (54.44%), Postives = 124/169 (73.37%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVF+N++ V++ G LGL+DTAGQEDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD + PI+ E+L + + A Y+ECS+ TQ+ +K VFD A Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFNNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEA 172
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACF2_DICDI (Rho-related protein racF2 OS=Dictyostelium discoideum GN=racF2 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49 Identity = 95/167 (56.89%), Postives = 125/167 (74.85%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFD 686 IKCV VGDGAVGKTC+LISYT+N FP++Y+PTVFDN+ AN++++G +LGLWDTAGQE+Y+RLRPLSY DVF++ FS+IS++S+ENVS KW E+ H+APGVPI+LVGTK D+R+D + + +G E K I A Y+E S+ TQ+ VK VFD Sbjct: 4 IKCVVVGDGAVGKTCMLISYTTNGFPSEYLPTVFDNYCANLMLDGKPYSLGLWDTAGQEEYDRLRPLSYPQTDVFLICFSIISQSSFENVSTKWFKEVNHHAPGVPIVLVGTKQDIRNDNDSIKKLKERNIELVPYEKGLEKAKEINA-IYLEASALTQRGVKNVFD 169
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACA_DICDI (Rho-related protein racA OS=Dictyostelium discoideum GN=racA PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.300e-48 Identity = 92/167 (55.09%), Postives = 122/167 (73.05%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IK V VGDGAVGK+CLLI+YT+N FP +YVPTVFDN+SANV+++G NLGLWDTAGQEDY+RLRPLSY DVF++ FS++S+AS+EN+ KW PE+ H+AP +PI+LVGTK DLR + P +S A+ L + +G Y+E S+ Q N++ +F A Sbjct: 4 IKLVVVGDGAVGKSCLLIAYTTNAFPGEYVPTVFDNYSANVMIDGKPFNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSIVSRASFENIRAKWYPEILHHAPNIPIVLVGTKNDLRGHHD--LKRP---EVSAAEANNLVRELGFSGYVETSALLQTNLRELFSLA 165
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACD_ENTHI (Rho-related protein racD (Fragment) OS=Entamoeba histolytica GN=RACD PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.217e-48 Identity = 91/172 (52.91%), Postives = 122/172 (70.93%), Query Frame = 3 Query: 183 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 ++ +K V VGDG+VGKTCLLI YT+N FP DYVPTVFDN+ A + V+G +NLGLWDTAGQED +LRPLSY D+F+L FS+IS+ S+ N+S KW+PE+KHY P +++VGT D R+D+ + PI+T +GE+L K I A Y+ECS+ T+ + VFD A Sbjct: 6 AKSVKLVVVGDGSVGKTCLLICYTTNEFPKDYVPTVFDNYMAPMTVDGEPINLGLWDTAGQEDSEQLRPLSYPNTDLFLLCFSVISRTSFNNISSKWLPEIKHYEPKCKMMVVGTNTDCRNDEAMIRKLADENQKPITTEEGEKLAKDIKAICYMECSALTRSGLNQVFDEA 177
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RAC2_CAEEL (Ras-related protein rac-2 OS=Caenorhabditis elegans GN=rac-2 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.451e-47 Identity = 92/169 (54.44%), Postives = 119/169 (70.41%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFF--IDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IKCV VGDGAVGKTCLL+SYT+N FP +Y+ TVFD +S NV+V+G +NL LWDTAGQ+DY++ R LS+ DVF++ F+L + AS+ENV KW PE+ H+ P PIILVGTK DLR+D+ + P+S QG + K I A Y+ECS+ TQ +K VFD A Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALTQIGLKQVFDEA 172
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHOU_HUMAN (Rho-related GTP-binding protein RhoU OS=Homo sapiens GN=RHOU PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.539e-46 Identity = 90/171 (52.63%), Postives = 125/171 (73.10%), Query Frame = 3 Query: 186 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFI--DHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 R +KCV VGDGAVGKT L++SYT+N +PT+Y+PT FDNFSA V V+G V L L DTAGQ+++++LRPL Y D+F+L FS++S +S++NVS+KW+PE++ + P PIILVGT+ DLR+D + I D P+ + + I A +YIECS+ TQ+N+K VFDAA Sbjct: 48 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAA 218
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RACH_DICDI (Rho-related protein racH OS=Dictyostelium discoideum GN=racH PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.622e-46 Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGV-PIILVGTKLDLRDDKQFFIDHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 IK + VGD +VGKTCLLISYT+N+FP +YVPTVFDN++AN +VN + +NLGLWDTAG E+YN RPLSY G DVFI+ FSLIS+ S+ENV KKW PE+ V PIILVGTKLDLR + ++ GE++R IGA Y ECS+ TQ + VF+ A Sbjct: 5 IKVMVVGDMSVGKTCLLISYTTNSFPGEYVPTVFDNYNANAIVNNTPINLGLWDTAGSEEYNSFRPLSYPGTDVFIICFSLISQTSFENVIKKWHPEIIQNMEQVPPIILVGTKLDLRGKGK-----SEEKEVTPEMGEQMRAAIGAYKYSECSALTQDGLTTVFEEA 167
BLAST of CX296866 vs. ExPASy Swiss-Prot
Match: RHOU_BOVIN (Rho-related GTP-binding protein RhoU OS=Bos taurus GN=RHOU PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.885e-46 Identity = 89/169 (52.66%), Postives = 123/169 (72.78%), Query Frame = 3 Query: 192 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFI--DHPGAVPISTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAA 692 +KCV VGDGAVGKT L++SYT+N +PT+Y+PT FDNFSA V V+G V L L DTAGQ+++++LRPL Y AD+F+L FS++ +S++NVS+KW+PE++ + P PIILVGT+ DLR+D + I D P+ + I A +YIECS+ TQ+N+K VFDAA Sbjct: 47 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVKLQLCDTAGQDEFDKLRPLCYTNADIFLLCFSVVGPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAARLCAEEIKATSYIECSALTQKNLKEVFDAA 215 The following BLAST results are available for this feature:
BLAST of CX296866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296866 ID=CX296866; Name=CX296866; organism=Citrus clementina; type=EST; length=693bpback to top |