CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 49/163 (30.06%), Postives = 90/163 (55.21%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP----NGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDV 506
            H     PI+HRD+KP NILLD     K+ D G++KLI+        ++  TI+ GT  Y+DPEY+ +  +  KSD+Y+ G++ L++LT   P      ++ +V  A   G    ++D+S+  +     +    +A++C    C+D P+    ++ ++R+L+++
Sbjct:  744 HTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISHGRNIVREVNEACDAGMMMSVIDRSMGQYSEECVKRFMELAIRC----CQDNPEARPWMLEIVRELENI 902          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----CLPNGVLLK-----VESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            PI+HRD+K  NILLD N  +K+ D G ++LI         E   T++ GTL Y+DPEY+ TG +  KSD+Y+FGV++++LL+     C       K       SA+K     +I+D  +  ++   E +E A IA++C+ +   +RP +  EV   L  L+
Sbjct:  528 PIIHRDVKTANILLDENLTAKVADFGASRLIPMD-----QEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSM-KEVAAELEALR 682          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 64/186 (34.41%), Postives = 96/186 (51.61%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----CLPNGVLLK-----VESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPSH 557
            H+S   PI+HRD+K  NILLD N  +K+ D G ++LI         E  ET++ GTL Y+DPEY+ TG +  KSD+Y+FGV++++LL+     C       K       +A K     +I+   +  +  L E +E A IA +C+ L   +RP           ++K+VA    KLE+  V    H
Sbjct:  523 HSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMD-----KEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERP-----------RMKEVA---AKLEALRVEKTKH 689          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 58/167 (34.73%), Postives = 91/167 (54.49%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----CL-----PNGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+S   PI+HRD+K  NILLD N  +K+ D G ++LI     D       T++ GTL Y+DPEY+ TG +  KSD+Y+FGV++++LL+     C         ++    SA K     +I+D  +  +    E ++ A IA++C+ L   +RP +  EV   L  L+
Sbjct:  524 HSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKED-----LATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGM-KEVAAELEALR 684          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17
Identity = 54/155 (34.84%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVES---------AIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDL 464
            H+S   PI HRD+K  NI+LD  Y +K+ D G ++ ++    D+   +  T+++GT+ YMDPEY ++     KSD+Y+FGV++++L+T       L   E+         A+K     DI+D  I D   L++    A +A KC NL+ R RP +
Sbjct:  562 HSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVT---VDHT--HLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSM 711          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.360e-17
Identity = 59/178 (33.15%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT----------------SCLPNGVLLKVESAIKNGSFADILDKSITDWPLAE---TEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDV 506
            HN    PI+HRD+K  NILLD N+V+++ D GL+ +      D+    R T  AGT+ Y+DPEY+    +  KSD+Y  GV++L+LLT                 C+P  ++     AI     + ILD  +    L E    E +A  A+ C N   R+RP + T+++  L +  D+
Sbjct:  620 HNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADELSTILDPRVGSPELGEGDAVELVAYTAMHCVNAEGRNRPTM-TDIVGNLERALDL 796          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.082e-17
Identity = 59/182 (32.42%), Postives = 96/182 (52.75%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVES----------AIKNGSFADILDKSITDWPLAE-TEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNV 542
            H++   PI HRD+K  NILLD  Y +K+ D G ++ ++         +  T+++GT+ Y+DPEY+R+     KSD+Y+FGVI+ +L+T   P  ++   +           A+K    +DI+D  I D    E    +A +A+KC + R R+RP++  EV   L ++      C   E S V
Sbjct:  559 HSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTID-----QTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNM-REVFTELERI------CTSPEDSQV 728          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.025e-17
Identity = 54/168 (32.14%), Postives = 93/168 (55.36%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITE-YRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H++   P+ HRD+K  NILLD  Y +K+ D G ++ I      N+ + +  T++AGT  Y+DPEY +T     KSD+Y+FGV++++L+T   P          G++     A+K     DI+D  I +   L +   +A +A +C +L+ + RP++  EV   L +++
Sbjct:  535 HSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSI------NVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNM-REVSVELERIR 695          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.866e-17
Identity = 56/184 (30.43%), Postives = 103/184 (55.98%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAK--LISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESAI-KNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAP 551
            H      IVHRD+K  NILL   + +KI D GL++  LI +       E + T++AGT  Y+DPEYH+T  +  KSD+Y+FGV++L++++          N  +++  S I +NG    I+D ++  D+  +   ++  +A+ C N   ++RP++ ++V+ VL +  +  +   K +  ++ +P
Sbjct:  673 HTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGN-------EAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNM-SQVVHVLNECLETCEKWRKSQEVDLSSP 848          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16
Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP--------NGVLLKVESAIKNGSFADILDKSI--TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            PI+HRD+K  NILLD +  +K+ D GL+KL+ D    ++T    T + GT+ Y+DPEY+ T  +  KSD+Y FGV++L+LLT   P          V  K++ +       ++LD +I      L   E+   +AL+C      +RP + +EV+  L  +
Sbjct:  753 PIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVT----TQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTM-SEVVQELESI 907          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
Y5374_ARATH1.634e-1830.06Probable LRR receptor-like serine/threonine-protei... [more]
WAK5_ARATH2.787e-1835.40Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAK1_ARATH3.641e-1834.41Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
WAK4_ARATH6.210e-1834.73Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
WAKLH_ARATH1.383e-1734.84Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
ACCR3_ARATH2.360e-1733.15Putative serine/threonine-protein kinase-like prot... [more]
WAKLM_ARATH3.082e-1732.42Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLI_ARATH4.025e-1732.14Wall-associated receptor kinase-like 22 OS=Arabido... [more]
Y1755_ARATH6.866e-1730.43Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH1.171e-1634.38Probable leucine-rich repeat receptor-like protein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
back to top