CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.340e-12
Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN-------GVLLKVESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRD+K  NILL+ ++  +I D GLA+L     P++ T    T +AGTL YM PEY   G +  K+D+Y+FGV++++++T    N        +L  V S  +  +  + +D  + D +   E   L  I L C       RP +   V
Sbjct:  444 IIHRDIKLSNILLEDDFTPRIADFGLARLF----PEDKTHI-STAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVV 588          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12
Identity = 58/211 (27.49%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGSF---------------ADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPSHFFCPILQVKSHSQLQKRDLQVTFSIL 635
            IVHRD+K  N+LLD+    KI D GLAKL      +  + +  T +AGT  YM PEY   G +  K+D+Y+FG++ L+++     +G   K+E + KN +F                +++D  + +++   E   +  IA+ C++    +RP + +EV+ +L   K V     KLE ++V+  +     +  +K + ++  +++  + S++
Sbjct:  746 IVHRDIKATNVLLDKQLNPKISDFGLAKL-----DEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIV-----HGRSNKIERS-KNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSM-SEVVKMLEGKKMV--EVEKLEEASVHRETKRLENMNTMKKYYEMIGQEISTSMSMI 942          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12
Identity = 53/178 (29.78%), Postives = 91/178 (51.12%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQ------LLTSCLPNGVLLKVESAI---KNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLES 533
            H      I+HRD+K  NILLD N+V+K+ D GL+K    A P     +  T + G+  Y+DPEY R   +  KSD+Y+FGV++ +      ++   LP   +   E A+   K  +   I+D ++  ++     E+   IA KC     ++RP +  EV+  L  +  + +A ++ ++
Sbjct:  633 HTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSK----AGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMG-EVLWSLEYVLQIHEAWLRKQN 805          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12
Identity = 52/168 (30.95%), Postives = 79/168 (47.02%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGV----------LLKVESAIKNGSFA----DILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVAD 512
            I+HRD+K  NILLD ++ + + D GLAK + D           + +AG+  Y+ PEY  T  +  KSD+Y+FGV++L+L+    P G           +   E  I   S A     I+D  +T +PL     +  IA+ C       RP +   V  +    K VA+
Sbjct:  813 ILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECM----SSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHMLTNPPKSVAN 976          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 51/152 (33.55%), Postives = 72/152 (47.37%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESA---IKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRD+K  N+LL  + V+KI D  L    S+  PD       T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LLT        LP G    V  A   +        +D  +  D+P     +LA +A  C       RP++   V
Sbjct:  199 IIHRDIKSSNVLLFEDDVAKIADFDL----SNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVV 346          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 34/87 (39.08%), Postives = 54/87 (62.07%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 290
            H    +P++HRD+K  NILLD N ++K+ D GL+K      P+    +  T + G+  Y+DPEY R   +  KSD+Y+FGV++ ++L
Sbjct:  595 HTGDAKPVIHRDVKSANILLDENLMAKVADFGLSK----TGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVL 677          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 34/82 (41.46%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 296
            IVHRD+K  NILLD    +K+ D GL++    + P     +  T++AGT  Y+D EY++T  +  KSD+Y+FGV++L+++T+
Sbjct:  688 IVHRDVKSSNILLDDQLQAKLADFGLSR----SFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITN 765          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 50/165 (30.30%), Postives = 90/165 (54.55%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNG----VLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVL 488
            H+     I+HRD+K  NILLD  + + +GD GLA+L+     D    +  T + GT+ ++ PEY  TG    K+D++ +G+++L+L+T       + L N     +L  V+  +K      ++D  + +++  AE E+L  +AL C+     +RP + +EV+ +L
Sbjct:  421 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLM-----DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKM-SEVVRML 579          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 53/167 (31.74%), Postives = 88/167 (52.69%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL------PNGVLLKVESA----IKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            HN+ P+ +++RD K  NILLD NY +K+ D GLA+     + DN   +  T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LL+         P G    V+ A            ++D  +   + L    ++A +AL C ++  + RP ++ E++  + +L
Sbjct:  193 HNAQPQ-VIYRDFKASNILLDSNYNAKLSDFGLAR--DGPMGDN--SHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMN-EIVKTMEEL 353          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 55/166 (33.13%), Postives = 80/166 (48.19%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-----------KNGSFADILDKSITDWPLAETEELAC--IALKCSNLRCRDRPDLDTEVMPVLRKLKDVA 509
            I+HRDLK  NILLD     KI D GLA+        N TE     + GT  YM PEY   G    KSD+Y+FGV+IL+++     N    +++ ++            NGS  +++D +I +    + E + C  I L C      DRP + T    + R L +V+
Sbjct:  484 IIHRDLKASNILLDAEMNPKIADFGLARNFRV----NQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGG-KKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGE-NYDKDEVIRCIHIGLLCVQENPDDRPSMST----IFRMLTNVS 639          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
CRK3_ARATH1.340e-1232.67Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y1534_ARATH1.750e-1227.49Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.750e-1229.78Probable receptor-like protein kinase At1g30570 OS... [more]
CLV1_ARATH1.750e-1230.95Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y2706_ARATH2.286e-1233.55Probable receptor-like protein kinase At2g47060 OS... [more]
Y5597_ARATH2.985e-1239.08Probable receptor-like protein kinase At5g59700 OS... [more]
Y1756_ARATH2.985e-1241.46Probable LRR receptor-like serine/threonine-protei... [more]
SERK2_ARATH2.985e-1230.30Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
NAK_ARATH2.985e-1231.74Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK21_ARATH2.985e-1233.13Cysteine-rich receptor-like protein kinase 21 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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