CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.985e-12
Identity = 51/156 (32.69%), Postives = 76/156 (48.72%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI------------KNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            I+HRDLK  NILLD +   KI D GLA +         T+     +AGT  YM PEY   G    KSD+Y+FGV++L++++    +GV    E++             +N S  +++D +   ++   E      IAL C      DRP L T ++
Sbjct:  471 IIHRDLKASNILLDADMNPKIADFGLATIFGV----EQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIIL 622          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 50/165 (30.30%), Postives = 88/165 (53.33%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNG----VLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVL 488
            H+   + I+HRD+K  NILLD  + + +GD GLAKL+     +    +  T + GT+ ++ PEY  TG    K+D++ +GV++L+L+T       + L N     +L  V+  +K      ++D  +   +   E E+L  +AL C+     +RP + +EV+ +L
Sbjct:  410 HDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----NYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKM-SEVVRML 568          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 45/151 (29.80%), Postives = 78/151 (51.66%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS-------CLPNGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            PI+HRD+K  N+L+D+N  +K+GD GLA  I   + D   + + T  AGT+ Y+DP+Y     +  K+D+++FG+++L++++          P+ ++      IK G    I D  I     ++    L  +A KC       RP ++  V
Sbjct:  180 PIIHRDIKSANVLMDKNLNAKLGDFGLA--IRCNVDDQ--KVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDVRYSPSFIVDWAIPMIKRGKIGGIYDPRIGPPIDVSVRNHLGLVAAKCVRTCREKRPGMEEVV 326          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP--------NGVLLKVESAIKNGSFADILDKSITDWPLA-ETEELACIALKCSNLRCR--DRPDLDTEVMPVLRKLK 500
            HN  P  I+HRD+K  N+LLD N  +++ D G+A+L+S       T    + LAGT  Y+ PEY+++     K D+Y++GV++L+LLT   P        N ++  V+   K G   D+ D+ +     + E E L  + + C+ L  R   RP +  +VM + ++++
Sbjct: 1004 HNCIPH-IIHRDMKSSNVLLDENLEARVSDFGMARLMSAMD----THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWVKLHAK-GKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTM-IQVMAMFKEIQ 1164          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP--------NGVLLKVESAIKNGSFADILDKSITDWPLA-ETEELACIALKCSNLRCR--DRPDLDTEVMPVLRKLK 500
            HN  P  I+HRD+K  N+LLD N  +++ D G+A+L+S       T    + LAGT  Y+ PEY+++     K D+Y++GV++L+LLT   P        N ++  V+   K G   D+ D+ +     + E E L  + + C+ L  R   RP +  +VM + ++++
Sbjct: 1004 HNCIPH-IIHRDMKSSNVLLDENLEARVSDFGMARLMSAMD----THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWVKLHAK-GKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTM-IQVMAMFKEIQ 1164          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 55/175 (31.43%), Postives = 87/175 (49.71%), Query Frame = 3
Query:   33 NS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL--TSCLPNGVLLKVESAI--------KNGSFADILDKSITDWPLAE-TEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVK 524
            +S P  +++RD+K  NILLD ++ +K+ D GLA+   D  P     Y  T + GT  Y  PEY  TG +  +SD+Y+FGV++L+LL     L +    K ++ +               I+D  +      E    LA IA++C +   + RP +D     V+R L  + D+ VK
Sbjct:  187 HSDPVKVIYRDIKASNILLDSDFNAKLSDFGLAR---DG-PMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMD----QVVRALVQLQDSVVK 353          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVES 332
            PIVHRD+K  N+LLD N  + +GD GLAK+++     N TE   T+ AG+  Y+ PEY  +     KSD+Y+ G+++++++T  +P   +   E+
Sbjct: 1074 PIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTN-TE-SNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEET 1166          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 48/151 (31.79%), Postives = 71/151 (47.02%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNG-----------VLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDT 470
            I+HRDLK  NILLD+    KI D GLAKL        +T    + +AGT  YM PEY   G    K+D+++FGV++++++T    N            +L  V  + +  +   ++D S+T     E      I L C       RP + T
Sbjct:  478 IIHRDLKASNILLDQEMNPKIADFGLAKLFDSG--QTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLCVQESAATRPTMAT 626          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT----------SCLPNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDT 470
            I+HRDLK  NILLD +   KI D G+A++    +   +      +  GT  YM PEY   G    KSD+Y+FGV+IL++++            L N ++  V    +N S  ++LD  I  D+   E      I L C      DRP + T
Sbjct:  460 IIHRDLKASNILLDADMNPKIADFGMARIFG--VDQTVANTGRVV--GTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMST 606          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 49/168 (29.17%), Postives = 88/168 (52.38%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSITDWPLAETE--ELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+S    I+HRD+K  N+LLD ++ +++ D G+A+L+S       T    + LAGT  Y+ PEY+++     K D+Y++GVI+L+LL+   P         N ++   +   +    A+ILD  +      + E      IA +C + R   RP +  ++M + +++K
Sbjct:  976 HHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSAL----DTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTM-IQLMAMFKEMK 1138          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
CRK11_ARATH2.985e-1232.69Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
SERK4_ARATH3.899e-1230.30Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CCR35_ARATH3.899e-1229.80Serine/threonine-protein kinase-like protein At3g5... [more]
BRI1_SOLPE3.899e-1231.55Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC3.899e-1231.55Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y3545_ARATH5.092e-1231.43Probable receptor-like protein kinase At3g55450 OS... [more]
GSO2_ARATH5.092e-1237.89LRR receptor-like serine/threonine-protein kinase ... [more]
CRK29_ARATH5.092e-1231.79Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK18_ARATH5.092e-1233.11Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
BRL1_ARATH5.092e-1229.17Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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