CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 48/152 (31.58%), Postives = 77/152 (50.66%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGSFADILD---KSITDWPLAET----EELAC--IALKCSNLRCRDRPDLDTEV 476
            PI+HRDLK  N+LLD   + KI D G+A+         +T      + GT  YM PEY   G    K+D+Y+FGV++L+++T    +G+ L   + +   ++ + ++     + D  L +T    E + C  IAL C       RP +D+ V
Sbjct:  453 PIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRR----VVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGLGEGTDLPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVV 600          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 53/157 (33.76%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLI----SDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-------KNGSFADILDKSITDWPLAETEELAC--IALKCSNLRCRDRPD 461
            H      I+HRDLK GNILLD +   K+ D G A++     S AI  N         AGT  YM PEY   G    KSD+Y++GV++L+++           V++ +       K+G+  +++D +I +   +E E + C  IAL C      DRPD
Sbjct:  472 HQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANA--------AGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSE-EVIRCIHIALLCVQEEPTDRPD 619          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNG----VLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVL 488
            H+     I+HRD+K  NILLD  + + +GD GLAKL+     D    +  T + GT+ ++ PEY  TG    K+D++ +GV++L+L+T       + L N     +L  V+  +K      ++D  +  ++   E E+L  +AL C+     +RP + +EV+ +L
Sbjct:  405 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM-SEVVRML 563          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 290
            H    + I+HRD+K  NILLD N V+K+ D GL+K   DA  D    +  T + G+  Y+DPEY R   +  KSD+Y+FGV++ ++L
Sbjct:  644 HTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSK---DAPMDE--GHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 725          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESA---------IKNGSFADILDKSITD-------WPLAETEELAC 416
            H    + I+HRD+K  NILLD NYV+K+ D GL++    + P     +  T + G+  Y+DPEY R   +  KSD+Y+FGV++ ++L +      LL  E            + G    I+D +I D          AET E  C
Sbjct:  602 HTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSR----SGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCC 742          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 50/158 (31.65%), Postives = 88/158 (55.70%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL---------PNGVLL--KVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVL 488
            I+HRD+K  N+LLD ++ + +GD GLAKL+ D    N+T    T + GT+ ++ PEY  TG    ++D++ +G+++L+L+T             + VLL   V+   +      I+DK++  ++   E E +  +AL C+     DRP + +EV+ +L
Sbjct:  413 IIHRDVKAANVLLDEDFEAVVGDFGLAKLV-DVRRTNVT----TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVM-SEVVRML 564          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 293
            H      ++HRD+KP NILLD NY + + D GL+KL+  +       +  T +AGT  Y+ PEY  T  +  K+D+Y++G+++L+L++
Sbjct:  374 HEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTS-----QSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELIS 456          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 293
            H+    P+++RD K  NILLD  +  K+ D GLAKL     P     +  T + GT  Y  PEY  TG +  KSD+Y+FGV+ L+L+T
Sbjct:  202 HDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLG----PTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 285          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 46/158 (29.11%), Postives = 76/158 (48.10%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP--NGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            H    + ++HRD+KP N+L++ +   ++GD GLA+L       N T     ++ GT+ YM PE  R G     SD++AFGV++L++++   P  +G     +  ++  +  +IL               A +AL    L C  RP     +  VLR L
Sbjct:  479 HEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTT-----VVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYL 631          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 44/151 (29.14%), Postives = 73/151 (48.34%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP--NGVLLKVESAIK---NGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDL 464
            H    + ++HRD+KP N+L+D     ++GD GLA+L         T    T L GT+ YM PE  R G     SD++AFGV++L+++    P  +G    V+  ++   NG     +D  + + +   E      + L C + +   RP +
Sbjct:  483 HEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERG-----TLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSM 628          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
CRK27_ARATH8.685e-1231.58Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK13_ARATH8.685e-1233.76Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
BAK1_ARATH8.685e-1230.91BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5613_ARATH1.134e-1142.53Probable receptor-like protein kinase At5g61350 OS... [more]
Y5241_ARATH1.134e-1133.10Probable receptor-like protein kinase At5g24010 OS... [more]
Y5129_ARATH1.134e-1131.65Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH1.134e-1137.50Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH1.134e-1142.05Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
LRKA2_ARATH1.134e-1129.11Lectin-domain containing receptor kinase A4.2 OS=A... [more]
LRKA1_ARATH1.134e-1129.14Lectin-domain containing receptor kinase A4.1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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