CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 293
            I+HRDLK  NILLD     KI D G+A+L      D+ T+     + GT  YM PEY   G    K+D+Y+FGV++L++++
Sbjct:  465 IIHRDLKASNILLDEEMTPKIADFGMARLFDI---DHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIIS 542          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKN--------GSFADILDKSITDWPLAE----TEELAC--IALKCSNLRCRDRPDLDT 470
            I+HRDLK GNILLD +   KI D G+A+        + TE     + GT+ YM PEY   G    KSD+Y+FGV+IL+++     N  + + + +I N         +   +L+  + D P+ E     E + C  I L C      DRP + T
Sbjct:  433 IIHRDLKAGNILLDADMNPKIVDFGVARNFRV----DQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGG-KKNSSINETDGSISNLVTYVWRLWNNEPLLE--LVDAPMGENYDRNEVIRCIHIGLLCVQENPADRPTMST 579          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 293
            +++RD K  NILLD  + SK+ D GLAK    A P     +  T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LL+
Sbjct:  212 VIYRDFKAANILLDAEFNSKLSDFGLAK----AGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLS 288          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
CRK26_ARATH9.603e-1141.98Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK24_ARATH9.603e-1133.77Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
APK2B_ARATH9.603e-1144.44Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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