CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPSH 557
            HN     I+HRD+K  NILLD++  +K+ D GL+K  + A   +IT    T++ GT  Y+DPEY+ T  +  KSD+Y+FGV++L+L+    P           ++L     ++ G+F  + D     +  A  ++ A IA++C       RP     +  VL KLK+       L+ S + A +H
Sbjct:  721 HNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHIT----TVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGAFEIVDDILKETFDPASMKKAASIAIRCVGRDASGRP----SIAEVLTKLKE----AYSLQLSYLAASAH 893          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16
Identity = 55/171 (32.16%), Postives = 92/171 (53.80%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVE---------SAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVAD 512
            H++   PI HRD+K  NI+LD  + +K+ D G ++ ++    D+   +  T+++GT+ YMDPEY ++     KSD+Y+FGV++ +L+T       L   E          A+K    +DI+D  I D   L +    A IA KC N++ R RP +  +V   L K++  ++
Sbjct:  548 HSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVT---VDHT--HLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSM-RQVSMELEKIRSYSE 712          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVES----------AIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVY 545
            H+S   PI HRD+K  NILLD  Y +K+ D G ++ ++         +  T+++GT+ Y+DPEY+++     KSD+Y+FGVI+ +L+T   P  ++   +           A+K     DI+D  I  D    +   +A +A+KC + + + RP++  EV   L ++      C   E S V+
Sbjct:  568 HSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTID-----QTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNM-REVFTELERI------CTSPEDSQVH 738          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16
Identity = 54/167 (32.34%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN---------GVLLKVESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H++   PI HRD+K  NILLD  Y  K+ D G ++ ++         +  T +AGT  Y+DPEY ++     KSD+Y+FGV++++L+T   P+         G      +A+K   F DI+D+ I D   L +   +A +A +C N + + RP++  EV   L +++
Sbjct:  538 HSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTID-----QTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNM-REVSVELERIR 698          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 57/177 (32.20%), Postives = 92/177 (51.98%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLK-------VESAIKNGSFADILD-KSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESS 536
            HN    P+VHRD+K  NILL+  Y +K+ D GL++    + P +   +  T++AGT  Y+DPEY+RT  +  KSD+Y+FGV++L+++T+        +       V S +  G    ILD K + D+      ++  +AL C N     RP +   V  +        + CV LE++
Sbjct:  679 HNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSR----SFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTEL--------NECVALENA 843          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.407e-16
Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS--CLPNGVLLK------VESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            HN    PIVHRD+KP NILL+    +K+ D GL++  S      I+    T++AG++ Y+DPEY+ T  +  KSD+Y+ GV++L+++T    + +    K      V S + NG    I+D+ + + + +    +++ IAL C+      RP +   VM
Sbjct:  686 HNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQIS----TVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVM 840          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.450e-16
Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H++   PI HRD+K  NILLD  Y +K+ D G ++ ++         +  T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P          G+      A+K     DI+D  I D   L +   +A +A KC N + ++RP++  EV   L +++
Sbjct:  543 HSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLD-----QTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNM-KEVSNELERIR 703          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PUB50_ARATH (Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.450e-16
Identity = 80/258 (31.01%), Postives = 108/258 (41.86%), Query Frame = 3
Query:   21 GTRHNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDT-EVMPVLRKLKDVAD------ACVKLESSNVYA------PSHFFCPILQVKSHSQLQKRDLQVTFSILACISYRFFYLLHLG*I*EVMEDPYIAADGFTYEHRAIKAW 755
            G  H+  P+PIVH  L P  ILLDRN V KI   GL                          M  +   T     K D+ AFGV++L LLT    +G LLK  S  +     D LD++   WPL   +E   +A+KCS++      D  T E+M  L K+++ AD         +  +SN+        PS F CPILQ                                    EVM++P++AADGF+YE  AI+ W
Sbjct:  533 GFLHSVKPKPIVHGRLTPSKILLDRNLVPKITGFGLI-------------------------MHSDQSDT-----KPDVMAFGVLLLHLLTGRNWHG-LLKAMSMNQTSILRD-LDQTAGKWPLELAKEFGALAVKCSSVNRGGNMDFSTKEIMEELGKIREKADEFKTKGGYEEATNSNMDEGDPNDIPSVFMCPILQ------------------------------------EVMKNPHVAADGFSYELEAIQEW 722          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16
Identity = 52/150 (34.67%), Postives = 86/150 (57.33%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESA---------IKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLD 467
            P++HRD+K  NIL+D ++ +++ D GL+ L      D+ T   E + AGTL Y+DPEY+R   +  KSD+Y+FGV++L++L+      + ++ E           IK G    ILD  ++    L   +++A +A KC  +R +DRP +D
Sbjct:  629 PVIHRDIKSSNILIDEDHNARVADFGLSIL---GPADSGTPLSE-LPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSG--RKAIDMQFEEGNIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMD 772          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP----------NGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRD+K  NILLD N+V+K+ D GL+++   +       +  T++ GT  Y+DPEY+R   +  KSD+Y+FGV++L++L  C P            ++  V+S  + G+   I+D  ++ D      E+   IA++C   R  +RP ++  V
Sbjct:  642 IIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQT---HVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL-CCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVV 790          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
Y5487_ARATH1.998e-1631.89Probable LRR receptor-like serine/threonine-protei... [more]
WAKLJ_ARATH1.998e-1632.16Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLN_ARATH2.609e-1630.60Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLD_ARATH2.609e-1632.34Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
Y5188_ARATH3.407e-1632.20Probable LRR receptor-like serine/threonine-protei... [more]
SIRK_ARATH3.407e-1632.70Senescence-induced receptor-like serine/threonine-... [more]
WAKLA_ARATH4.450e-1632.93Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
PUB50_ARATH4.450e-1631.01Putative U-box domain-containing protein 50 OS=Ara... [more]
CRI4_MAIZE5.812e-1634.67Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5900_ARATH7.591e-1632.68Putative receptor-like protein kinase At5g39000 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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