CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 54/181 (29.83%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP----------NGVLLKVESAIKNGSFADILDKSITDWPLAE-TEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSN 539
            H++   PI HRD+K  NILLD  Y +K+ D G ++    ++  + T +  T+++GT+ Y+DPEY+ +     KSD+Y+FGV++++L+T   P           G+      A+K   F +I+D  I D    E    +A +A +C N + + RP +      + + L    D+ V +E+ +
Sbjct:  565 HSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSR----SVTIDHTHWT-TVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKILASQEDSLVNIENDD 740          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 54/169 (31.95%), Postives = 95/169 (56.21%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLI-SDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP--------NGVLLKVESAIKNGS---FADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+    P++HRD+K  NILLD  +  +I D GLAK+I +D++     ++   ++ GTL Y+ PEY  T  +  KSD+Y+FGV++++L+T   P        N +++ V S  K  +      ++D SI D    +  ++  IAL C++   + RP + + V+ +L K++
Sbjct:  803 HHGLDRPVIHRDVKSSNILLDEEWRPRIADFGLAKIIQADSVQ---RDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDFGENNDIVMWVWSVSKETNREMMMKLIDTSIEDEYKEDALKVLTIALLCTDKSPQARPFMKS-VVSMLEKIE 967          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16
Identity = 54/161 (33.54%), Postives = 86/161 (53.42%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLK----------VESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            HN    P+VHRD+KP NILL+    +K+ D GL++    + P +   +  T++AGT  Y+DPEY+RT  +  KSD+Y+FGV++L+++T+     V+ K          V   + NG    I+D  +  D+      ++  +AL C N     RP +   VM
Sbjct:  683 HNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSR----SFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTN---QPVMNKNRERPHINEWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVM 836          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 48/155 (30.97%), Postives = 83/155 (53.55%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSITDWPLAET-EELACIALKCSNLRCRDRPDL 464
            H      +VHRD+K  NILLDR + +K+ D GLAKL+        + Y  T + GT  Y+ PEY  TG +  KSD+Y+FG++I++++T   P           ++  ++S + N    +++D  I + P ++  + +  +AL+C +     RP +
Sbjct:  269 HEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSE-----SSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKM 418          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----CLPNGVLLK-----VESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+    PI+HRD+K  NILLD N  +K+ D G +KL          E   T++ GTL Y+DPEY+ T  +  KSD+Y+FGV++++L++     C       K        A K     +I+D  +  +    E  E A +A++C+ L+  +RP +  EV   L  L+
Sbjct:  222 HSGASIPIIHRDIKTENILLDENLTAKVADFGASKL-----KPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRM-IEVAAELETLR 382          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15
Identity = 59/174 (33.91%), Postives = 91/174 (52.30%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT--SCLPNGVLLK--VESAIKNGSFADILDK--SITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLES 533
            H+     I+HRD+K  NILLD N+ + + D G+AK    +IP + T +  T + GT+ Y+DPEY RT  I  KSD+Y+FG+++L+LLT    + N   L   + S   + +  + +D   ++T   L    +   +AL C+     +RP +  EV  VL  L        KL S
Sbjct:  762 HHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAK----SIPASKT-HASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTM-LEVSRVLLSLVPSLQVAKKLPS 929          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT---SCLP-----NGVLLKVESAIK-NGSFADILDKSI---TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+     IVHRDLKP NILLD ++ +++ D G+AKLI        T+   +++AG+  Y+ PEY  T  +  KSD+Y++GVI+L+++T   S  P     N ++  V S +K      ++LDKS+         E +++  IAL C++    DRP +  +V+ +L++ K
Sbjct:  841 HHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQ-------TDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPM-RDVLLILQEAK 1001          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 53/171 (30.99%), Postives = 89/171 (52.05%), Query Frame = 3
Query:   18 FGTRHNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVES----------AIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            F   H +   PI HRD+K  NILLD  Y +K+ D G ++ +S         +  T+++GT+ Y+DPEY+ +     KSD+Y+FGV++++L+T   P   L + +           A++     +I+D  I  D  L +   +A +AL+C     + RPD+  EV   L ++
Sbjct:  564 FSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSID-----HTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDM-REVSTALERI 728          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 53/155 (34.19%), Postives = 86/155 (55.48%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVE---------SAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDL 464
            H++   PI HRD+K  NILLD  + +K+ D G+++ +  AI D    +  TI+ GT+ Y+DPEY ++     KSD+Y+FGV++++LLT   P  +L + E          A++N    +ILD  I  +    E   +A +A +C +L    RP +
Sbjct:  504 HSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSV--AIDDT---HLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTM 653          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN---------GVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPD-------LDTEVM 479
            H+     I+HRD+K  NILLD N  +++ D GLAKL+ D    +IT    TI+AGT  Y+ PEY ++G    K+D+Y+FGV++L++L+  LP           ++  +   I      +I+D S         + L  IA KC +    +RP        L++EVM
Sbjct:  416 HHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE-ESHIT----TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEVM 576          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
WAKLK_ARATH7.591e-1629.83Putative wall-associated receptor kinase-like 11 O... [more]
IKU2_ARATH7.591e-1631.95Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y5189_ARATH9.914e-1633.54Probable LRR receptor-like protein kinase At1g5189... [more]
Y1154_ARATH1.295e-1530.97Probable serine/threonine-protein kinase At1g01540... [more]
WAKLS_ARATH1.295e-1532.93Putative wall-associated receptor kinase-like 16 O... [more]
ERL1_ARATH1.295e-1533.91LRR receptor-like serine/threonine-protein kinase ... [more]
Y5148_ARATH1.691e-1534.32Probable leucine-rich repeat receptor-like protein... [more]
WAKLL_ARATH1.691e-1530.99Putative wall-associated receptor kinase-like 13 O... [more]
WAKLG_ARATH1.691e-1534.19Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
FEI2_ARATH1.691e-1533.73LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
back to top