CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.691e-15
Identity = 54/163 (33.13%), Postives = 83/163 (50.92%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESA----------IKNGSFADILDKSITDWPLAETE-ELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDV 506
            I+HRD+K  NILLD ++  K+ D GLA+LIS         +  T++AGT  Y+ PEY ++     K D+Y+FGVI+L+L+T   P G   K              I  G   D++D  +    L  ++  L  IA+ C       RP++    + VL+ LK++
Sbjct: 1039 IIHRDIKASNILLDGDFEPKVADFGLARLISAC-----ESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNM----LDVLKALKEI 1192          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15
Identity = 47/152 (30.92%), Postives = 82/152 (53.95%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL-------PNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            P+VHRD+K  NILLD +Y +K+ D GL++    + P     +  T++AGT  Y+DPEY+ T  +  KSD+Y+FG+++L+++T+          + +   V S +  G  A I+D  +  D+          +A+ C++     RP +   V+
Sbjct:  700 PMVHRDVKTTNILLDEHYKAKLADFGLSR----SFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHITQWVGSELNGGDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVI 847          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT--SCLPNGVLL--KVESAIKNGSFADILDK--SITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            H+     I+HRD+K  NILLD N+ +++ D G+AK    +IP   T Y  T + GT+ Y+DPEY RT  +  KSD+Y+FG+++L+LLT    + N   L   + S   + +  + +D   S+T       ++   +AL C+     +RP +  EV  VL  L
Sbjct:  765 HHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAK----SIPATKT-YASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNEANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQ-EVSRVLLSL 920          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15
Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP----------NGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRD+K  NILLD N+V+K+ D GL+++   +       +  T++ GT  Y+DPEY+R   +  KSD+Y+FGV++L++L  C P            ++  V+S     +   I+D  +T D      E+   IA++C   R  +RP ++  V
Sbjct:  649 IIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQT---HVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVL-CCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVV 797          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15
Identity = 52/179 (29.05%), Postives = 96/179 (53.63%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNV 542
            H     P+VHRD+K  NILLD++  +K+ D GL++        N++    T++AGT  Y+DPEY++T  +  KSD+Y+FG+++L++++       S     ++  V   I  G    I+D ++  D+ +    +   +A+ C +L    RP++      V+ +LK+    C+  E+S +
Sbjct:  691 HTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVS----TVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSREKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSR----VVNELKE----CLISETSRI 857          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 55/166 (33.13%), Postives = 87/166 (52.41%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN---------GVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPD-------LDTEVM 479
            H+     I+HRD+K  NILLD N  +++ D GLAKL+ D    +IT    TI+AGT  Y+ PEY ++G    K+D+Y+FGV++L++L+   P           V+  ++  I      DI+D +     +   + L  IA +C +    +RP        L++EVM
Sbjct:  418 HHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDE-ESHIT----TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVM 578          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 55/167 (32.93%), Postives = 87/167 (52.10%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI---------KNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVK 524
            IVHRD+K  NILLD   V K+ D GLAKL  D        +  T +AGT+ Y+ PEY   G +  K+D+YAFGV+ L+L++    +   L+ E            + G   +++D  +T++ + E + +  IAL C+      RP + + V+ +L    +V+D   K
Sbjct:  813 IVHRDVKASNILLDSKLVPKVSDFGLAKLYDDK-----KTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQLTEFNMEEGKRMIGIALLCTQTSHALRPPM-SRVVAMLSGDVEVSDVTSK 973          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 55/188 (29.26%), Postives = 99/188 (52.66%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS-------CLPNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL----------KDVADACVKLESSNVYAPSH 557
            P++HRD+K  NILLD N+ +K+GD GL++    + P     +  T +AG+  Y+DPEY+RT  +  KSD+++FGV++L+++TS          + +   V   + NG   +I+D S+  D+  +   +   +A+ C +     RP++ ++V   L++           +   D+   LE S  + P H
Sbjct:  711 PMIHRDIKSMNILLDNNFQAKLGDFGLSR----SFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNM-SQVANELQECLLTENSRKGGRHDVDSKSSLEQSTSFGPEH 893          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 55/178 (30.90%), Postives = 91/178 (51.12%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSC--------LPNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESS 536
            H     P+VHRD+K  NILLD ++ +K+ D GL++    + P     +  T +AGT  Y+DPEY+RT  +  KSD+Y+FG+++L+++TS          P+ +   V   +  G   +++D  +  D+      +   IA+ C N     RP +      V  +LK     C+ LE+S
Sbjct:  687 HTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSR----SFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPH-IAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMS----QVTNELKQ----CLTLENS 851          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.920e-15
Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT---------SCLPNGVLLKVESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRD+K  NILLD  + +K+ D GLAK      P+ +T +  T +AGT+ Y+ PEY   G +  KSD+Y+FGV++L+LL+            P  V     S ++ G   D+++  + +  P    E+   IA+ CS+ +   RP +D  V
Sbjct:  408 IIHRDIKASNILLDERFEAKVADFGLAKFN----PEGMT-HMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVV 554          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
EXS_ARATH1.691e-1533.13Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5596_ARATH2.209e-1530.92Probable LRR receptor-like serine/threonine-protei... [more]
ERL2_ARATH2.209e-1534.57LRR receptor-like serine/threonine-protein kinase ... [more]
Y5389_ARATH2.885e-1532.68Probable receptor-like protein kinase At5g38990 OS... [more]
Y2899_ARATH2.885e-1529.05Probable leucine-rich repeat receptor-like protein... [more]
FEI1_ARATH3.767e-1533.13LRR receptor-like serine/threonine-protein kinase ... [more]
Y5614_ARATH4.920e-1532.93Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH4.920e-1529.26Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH4.920e-1530.90Probable LRR receptor-like serine/threonine-protei... [more]
RKF3_ARATH4.920e-1534.21Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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