CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN---------GVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDL 464
            H++   PI HRD+K  NILLD  Y +KI D G ++ ++         +  T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P          G+      A+K     DI+D  I D    +   +A +A +C N +   RP++
Sbjct:  542 HSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATD-----QTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKD-ESKQVMAVAKLARRCLNRKGNKRPNM 689          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 57/176 (32.39%), Postives = 94/176 (53.41%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEEL---ACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLE 530
            H+    PIVHRD+K  NIL+  ++   IGD GLAKL+ D    +      TI AG+  Y+ PEY  +  I  KSD+Y++GV++L++LT        +P+G  L +   +K      ++D+ +   P +E EE+     +AL C N    DRP +  +V  +L ++    +  +K++
Sbjct:  909 HHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDG---DFARSSNTI-AGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDG--LHIVDWVKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTM-KDVAAMLSEICQEREESMKVD 1077          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 55/166 (33.13%), Postives = 86/166 (51.81%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-----------KNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVAD 512
            I+HRDLK GNILLD +   KI D G+A++       + TE     + GT  YM PEY   G    KSD+Y+FGV++L+++ S + N  L +++ ++            NGS ++++D S  D +  +E      IAL C      DRP + + V  +   L  +A+
Sbjct:  447 IIHRDLKAGNILLDDDMNPKIADFGMARIFGM----DQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEII-SGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAE 607          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 56/176 (31.82%), Postives = 96/176 (54.55%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEELACI---ALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLE 530
            H+    PIVHRD+K  NIL+  ++   I D GLAKL+ +    +I     T+ AG+  Y+ PEY  +  I  KSD+Y++GV++L++LT        +P G+ L V+   +N    ++LD ++     AE +E+  +   AL C N    +RP +  +V  +L+++K   +   K++
Sbjct:  908 HHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEG---DIGRCSNTV-AGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHL-VDWVRQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTM-KDVAAMLKEIKQEREEYAKVD 1077          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15
Identity = 47/153 (30.72%), Postives = 83/153 (54.25%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDL 464
            H+    PIVHRD+K  NILLD    +K+ D GL++    + P     +  T++AGT  Y+DPEY++T  +  KSD+Y+FG+++L+++T       S   + +   V   +  G    I+D ++  D+       +  +A+ C+N    +RP++
Sbjct:  693 HSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSR----SFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNM 841          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN 308
            H+S P PIVHRD+K  NILLD     ++ D GLAK +     D +++   + +AG+  Y+ PEY  T  +  KSD+Y+FGV++L+L+T   PN
Sbjct:  807 HDSVP-PIVHRDVKSNNILLDHEMKPRVADFGLAKPLKREDNDGVSDVSMSCVAGSYGYIAPEYGYTSKVNEKSDVYSFGVVLLELITGKRPN 898          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 49/158 (31.01%), Postives = 83/158 (52.53%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            HN    P+VHRD+K  NILL+ ++ +K+ D GL++        +++    T++AGT  Y+DPEYHRT  +  KSD+Y+FG+++L+++T       S     +   V   +  G    I+D S+  D+      +   +A+ C N     RP +   V+
Sbjct:  692 HNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVS----TVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVVI 845          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 49/155 (31.61%), Postives = 82/155 (52.90%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN---------GVLLKVESAIKNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDL 464
            H++   PI HRD+K  NILLD    +K+ D G ++ ++         +  T +AGT  Y+DPEY ++     KSD+Y+FGV++++LLT   P+         G+      A+K     DI+D  I D   + +   +A +A +C N + + RP++
Sbjct:  530 HSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTID-----QTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNM 679          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14
Identity = 49/158 (31.01%), Postives = 82/158 (51.90%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL-------PNGVLLKVESAIKNGSFADILD-KSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            HN    P+VHRD+K  NILL+ +  +K+ D GL++    + P     +  T++AGT  Y+DPEY+RT  +  KSD+Y+FG+++L+++T+ L          +   V   +  G   +I+D K   D+          +A+ C N     RP +   V+
Sbjct:  706 HNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSR----SFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSREKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVI 859          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 51/154 (33.12%), Postives = 83/154 (53.90%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT---SCLPN------GVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPD 461
            H+    PIVHRD+K  NILL+ N  +KI D GL+K+     P++   +  T + GT  Y+DPEY+ T  +  KSD+Y+FG+++L+L+T   S +         V+  VE  +K G    ++D  +  D+      +   +A+ C   R  +RP+
Sbjct:  693 HHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVF----PEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPN 842          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
WAKLC_ARATH6.426e-1533.12Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
RCH1_ARATH6.426e-1532.39LRR receptor-like serine/threonine-protein kinase ... [more]
CRK19_ARATH6.426e-1533.13Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
RCH2_ARATH8.393e-1531.82Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PAM74_ARATH8.393e-1530.72Probable LRR receptor-like serine/threonine-protei... [more]
HSL2_ARATH1.096e-1443.01LRR receptor-like serine/threonine-protein kinase ... [more]
Y5182_ARATH1.432e-1431.01Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH1.432e-1431.61Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
RLK6_ARATH1.432e-1431.01Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y4291_ARATH1.870e-1433.12Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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