CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14
Identity = 54/167 (32.34%), Postives = 85/167 (50.90%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI---------KNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVK 524
            IVHRD+K  NILLD   V +I D GLAKL  D        +  T +AGT+ Y+ PEY   G +  K+D+YAFGV+ L+L++    +   L+ E            +     +++D  +TD+ + E + +  IAL C+      RP + + V+ +L    ++ D   K
Sbjct:  814 IVHRDVKASNILLDSRLVPQISDFGLAKLYDDK-----KTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIALLCTQTSHALRPPM-SRVVAMLSGDVEIGDVTSK 974          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.442e-14
Identity = 59/180 (32.78%), Postives = 94/180 (52.22%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLK----------VESAIKNGSFADILD-KSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESS 536
            HN    P+VHRD+K  NILL+    +K+ D GL++    + P +   +  T++AGT  Y+DPEY+RT  +  KSD+Y+FGV++L+++T+     V+ K          V   +  G    I+D K + D+      ++  +AL C N     RP +   VM    +L D    CV LE++
Sbjct:  697 HNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSR----SFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTN---QPVIDKTRERPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVM----ELND----CVALENA 861          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.442e-14
Identity = 54/172 (31.40%), Postives = 89/172 (51.74%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNG---------VLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADA 515
            H   P   VHRD+K  NILLD++   KI D GLA+L      +    +  T +AGT+ YM PEY   G +  K+D+Y+FGV++L+++     +          +L      +++G    ++D+ +  +    E E +  +AL CS+    DRP L +EV+ +L  L  V ++
Sbjct:  796 HEESPLKFVHRDIKATNILLDKDLTPKISDFGLARL-----DEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRP-LMSEVVAMLEGLYPVPES 961          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 47/158 (29.75%), Postives = 81/158 (51.27%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL---------PNGVLLKVESAIKNGSFADILD----KSITDWPLAETEELACIALKCSNLRCRDRPDL 464
            H++   PI HRD+K  NILLD    +K+ D GL++L+      N   +  T   GTL Y+DPEY+R   +  KSD+Y+FGV++L+++TS              +++ +   +      + +D    K+     +   ++L  +A  C N R ++RP +
Sbjct:  479 HSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSM 636          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKL-ISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPN----------GVLLKVESAIKNGSFADILDKSI----TDWPLAETEELACIALKCSNLRCRDRPDL 464
            H+S   PI HRD+K  NILLD N   K+ D GL++L +SD        +  T   GTL Y+DPEY+    +  KSD+Y+FGV++ +LLT C              +++ V  A+K G   D++D  I    T+  +   + L  +A  C     + RP +
Sbjct:  473 HSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDV------SHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLT-CKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTM 625          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 48/173 (27.75%), Postives = 90/173 (52.02%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNV 542
            P+VHRD+K  NILLD N+ +K+ D GL++    +          T +AGTL Y+DPE + +G +  KSD+Y+FG+++L+++T       +   + +   V   +  G   +I+D ++  D+ +        +A+ C+      RP +      V+ +LK+    C+  E++ +
Sbjct:  684 PMVHRDVKTANILLDENFKAKLADFGLSR----SFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGDSHITQWVGFQMNRGDILEIMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMS----QVIHELKE----CIACENTGI 844          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 54/173 (31.21%), Postives = 91/173 (52.60%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNG----------VLLKVESAIKNG--SFADILDKSITDWPLAETEELAC-----IALKCSNLRCRDRPDLDTEVMPVLRKLKDVADA 515
            PIVH DLKP NILLD + V+ + D G A+++     D  T    +   GT+ Y+ PE+     +  K+D+++FG+I+++L+T   P            +   VE +I NG      +LD  + D  ++  +E A      + L C++ R  DRPD++ E++  L KL+  A++
Sbjct:  992 PIVHCDLKPANILLDSDRVAHVSDFGTARILGFR-EDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMN-EILTHLMKLRGKANS 1162          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 49/158 (31.01%), Postives = 81/158 (51.27%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS-------CLPNGVLLKVESAIKNGSFADILDKSITDWPLAET-EELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            P++HRD+K  NIL+D  + +++ D GL+ L        + E    + AGTL Y+DPEY+R   +  KSD+Y+FGV++L++L+             ++      IK G    +LD  +      E  + +  +A KC  +R +DRP +D     + R L
Sbjct:  636 PVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAE----LPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALERAL 789          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 52/167 (31.14%), Postives = 91/167 (54.49%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT---------SCLPNGVLLKVESAIK-NGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADAC 518
            I+HRD+K  NILLD ++ + +GD GLAKL+     D    +  T + GT+ ++ PEY  TG    K+D++ FGV+IL+L+T           +  G++L     +K    FA+++D+ +  ++     EE+  +AL C+    +  P+L   +  VL+ L+ + + C
Sbjct:  422 IIHRDVKAANILLDESFEAIVGDFGLAKLL-----DQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCT----QPHPNLRPRMSQVLKVLEGLVEQC 579          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 54/172 (31.40%), Postives = 86/172 (50.00%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITE--YRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSC-------------LPNGVLLKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+S   PI HRD+K  NILLD ++ SK+ D GL++L        +TE  +  T   GT  Y+DP+YH+   +  KSD+Y+FGV++ +++T               L    + K+ S   +     ILD  +  W L+    +A +A +C       RP + TEV   L +++
Sbjct:  461 HSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRL-------GMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDEIIDPILDLDLDAWTLSSIHTVAELAFRCLAFHSDMRPTM-TEVADELEQIR 624          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
Y1561_ARATH1.870e-1432.34Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH2.442e-1432.78Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH2.442e-1431.40Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH3.189e-1429.75Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLP_ARATH3.189e-1433.75Wall-associated receptor kinase-like 15 OS=Arabido... [more]
RLK7_ARATH3.189e-1427.75Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
FLS2_ARATH3.189e-1431.21LRR receptor-like serine/threonine-protein kinase ... [more]
ACR4_ARATH3.189e-1431.01Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5457_ARATH5.440e-1431.14Probable LRR receptor-like serine/threonine-protei... [more]
WAKLO_ARATH5.440e-1431.40Wall-associated receptor kinase-like 14 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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