CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDL 464
            H++   PI HRD+K  NILLD  Y +K+ D G ++ ++         +  T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P          G+      A+K     DI+D  I  +  L +   +A +A KC + +   RP++
Sbjct:  546 HSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTID-----QTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNM 695          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = 3
Query:   54 VHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP-------NGVLLKVESAIKN--GSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDL 464
            +HRD+K  NILLD  + +KI D GLA+  S+     +   R   + GT  YM PE  R G I PKSD+Y+FGV++L+++T  LP         +LL ++  I++   +  D +DK + D      E +  +A +C + +   RPD+
Sbjct:  308 IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMTSR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 447          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.440e-14
Identity = 53/154 (34.42%), Postives = 80/154 (51.95%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-----------KNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRDLK GNILLD +   K+ D G+A++       + TE     + GT  YM PEY   G    KSD+Y+FGV++L+++ S + N  L +++ +I            NGS ++++D S  D +  +E      IAL C      DRP +   V
Sbjct:  465 IIHRDLKAGNILLDADMNPKVADFGMARIFGM----DQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIV-SGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIV 613          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.105e-14
Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS----------CLPNGVLLKVESAIKNGSFADILD----KSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLK 500
            H+S   PI HRD+K  NILLD  + SKI D GL++L      D    +  T   GT  Y+DP+YH+   +  KSD+Y+FGV+++++++              N   L V+  I  G   DI+D    K I     A    LA +A +C +     RP +  E+   L ++K
Sbjct:  426 HSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRL--GMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVD-RIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTM-VEITEDLHRIK 592          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.105e-14
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESAI---KNGSFADILDKSI 377
            H    +P++HRD+K  NILLD N+++K+ D GL+K      P+    +  T + G+  Y+DPEY R   +  KSD+Y+FGV++ ++L +       LP  ++   E A+   K G    I+D+S+
Sbjct:  598 HTGDSKPVIHRDVKSANILLDENFMAKVADFGLSK----TGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSL 718          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.105e-14
Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL----------TSCLPNGVLLKVESAIKNGSFADILDKSITDWPLAETEE-LAC--IALKCSNLRCRDRPDLDTEVM 479
            I+HRDLK  NILLD + + KI D G+A++    I  ++   +   +AGT  YM PEY   G    KSD+Y+FGV+IL+++                 ++  V     NGS  +++D +I++    +TEE + C  IAL C     +DRP+L T +M
Sbjct:  488 IIHRDLKASNILLDADMIPKIADFGMARI--SGIDQSVANTKR--IAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISE--NCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMM 637          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 57/171 (33.33%), Postives = 86/171 (50.29%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI---------KNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLES 533
            IVHRD+K  N+LLD +  +KI D GLAKL  D        +  T +AGT+ YM PEY   G +  K+D+Y+FGV+ L++++         K E            + GS  +++D  + T +   E   +  IAL C+N     RP + + V  +  K+K V    VK E+
Sbjct:  791 IVHRDIKATNVLLDLSLNAKISDFGLAKLNDDE-----NTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIK-VQPPLVKREA 955          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 51/182 (28.02%), Postives = 87/182 (47.80%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT-------SCLPNGVLLKVESAIKNGSFADILDKSIT-DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAP 551
            HN     +VHRD+K  NILL+ ++ +K+ D GL++    + P     +  T++AGT+ Y+DPEY+RT  +  KSD+Y+FGV++L ++T       +     +   V   +  G    I D ++  D+      +   +A+ C N     RP +   V  +   L   +   V +      AP
Sbjct:  691 HNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSR----SFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNREKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELKECLASESSREVSMTFGTEVAP 868          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 53/156 (33.97%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   54 VHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL-------PNGVL-LKVESAIKNGSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            +HRD+K  NILLD+++ +KI D GLA+  S  +   +   R   + GT  YM PE  R G I PKSD+Y+FGV++L+L+T          P  +L +K E   +  +  D  D+ ++D   A  E +   A +C + +   RPD+  +V  +L+++
Sbjct:  308 IHRDIKSANILLDKDFTAKISDFGLAR-ASARLAQTVMTSR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLELITGLAAVDENREPQLLLDIKEEIEDEEKTIEDYTDEKMSDADPASVEAMYSAASQCLHEKKNRRPDI-AKVQQLLQEM 457          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 50/146 (34.25%), Postives = 81/146 (55.48%), Query Frame = 3
Query:   54 VHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP-------NGVLLKVESAIKN--GSFADILDKSITDWPLAETEELACIALKCSNLRCRDRPDL 464
            +HRD+K  NILLD ++ +KI D GLA+  S+     +   R   + GT  YM PE  R G I PKSD+Y+FGV++L+++T  LP         +LL ++  I++   +  D +D+ + D      E +  +A +C + +   RPD+
Sbjct:  309 IHRDIKSANILLDEDFTAKISDFGLAR-ASEKFAQTVMTSR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEEIEDEEKTIEDYVDRKMNDIDSTSIETMYSVASQCLHEKKNKRPDI 448          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
WAKLE_ARATH5.440e-1432.26Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
IRAK4_HUMAN5.440e-1434.93Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
CRK20_ARATH5.440e-1434.42Putative cysteine-rich receptor-like protein kinas... [more]
WAKLR_ARATH7.105e-1432.75Wall-associated receptor kinase-like 21 OS=Arabido... [more]
HERK_ARATH7.105e-1434.40Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK12_ARATH7.105e-1435.26Putative cysteine-rich receptor-like protein kinas... [more]
Y5343_ARATH9.279e-1433.33Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH9.279e-1428.02Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_MOUSE9.279e-1433.97Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
IRAK4_BOVIN9.279e-1434.25Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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