CX296869

Overview
NameCX296869
Unique NameCX296869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.279e-14
Identity = 52/184 (28.26%), Postives = 91/184 (49.46%), Query Frame = 3
Query:   48 PIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL---------PNGVLLKVESAIKNGSFADILDKSI---TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPSHFF 563
            P++HRD+K  NILLD  + +K+ D GL+++      ++   +     AGTL Y+DPEY++   +  KSD+Y+FGV++L+LL+            P  ++  V   I       ILD+ I   T + +     +  +A +C     R RP +    + V+ KL+    AC+    +   + S+ +
Sbjct:  574 PVIHRDIKSSNILLDATWTAKVSDFGLSQM--GPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHRILDQRIPPPTPYEIEAVAHVGYLAAECLMPCSRKRPSM----VEVVSKLESALAACLTAPKTETVSRSNTY 751          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 54/187 (28.88%), Postives = 93/187 (49.73%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP-------NGVLLKVESAIKNGSF-ADILDKSIT----DWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLESSNVYAPS 554
            H+     I+HRD+K  NIL+D N+ + +GD GLAK+I   +  ++     + +AG+  Y+ PEY  T  +  K D+Y+FGV++L+LLT   P         +     + I++ S  ++ILD  +T    D  L     +  IA+ C+     DRP +   V+ ++   +      V    S++  P+
Sbjct:  941 HHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSV-----SAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLIESGERAGKVIVSTTCSDLPPPA 1122          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.583e-13
Identity = 49/159 (30.82%), Postives = 86/159 (54.09%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL--------PNGVLLKVESAIKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVM 479
            H      +VHRD+K  NILLD  + +KI D GL++  S  +  + ++   T++AGTL Y+DPEY+ T  +  KSD+Y+FG+++L+++T+          PN +   V   IK G  + I+D  +  ++          +A+ C+N     RP++   ++
Sbjct:  680 HTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSR--SFQVGGDQSQV-STVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENPN-IAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVII 834          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.583e-13
Identity = 46/151 (30.46%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCL----PNGVLLKVESAIKNGSFADILDKSITDW--PLAETEELACIALKCSNLRCRDRPDL 464
            H+     I+HRD+K  NILLD++  +++ D G+AK +  +       +  T + GT+ Y+DPEY RT  +  KSD+Y++G+++L+LLT        + +   + S   N    ++ D  IT     L   +++  +AL C+  +  DRP +
Sbjct:  762 HHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVS-----KSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVDDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTM 907          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI----------KNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            IVHRD+K  N+LLD++  +KI D GLAKL  D        +  T +AGT+ YM PEY   G +  K+D+Y+FGV+ L+++ S   N      E  +          + GS  +++D ++ +D+   E   +  +AL C+N     RP +   V
Sbjct:  801 IVHRDIKASNVLLDKDLNAKISDFGLAKLNDDG-----NTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIV-SGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVV 947          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 51/154 (33.12%), Postives = 78/154 (50.65%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI-----------KNGSFADILDKSITD-WPLAETEELACIALKCSNLRCRDRPDLDTEV 476
            I+HRDLK GNILLD +   K+ D G+A++       + TE     + GT  YM PEY   G    KSD+Y+FGV++ +++ S + N  L +++ ++            NGS  D++D S  D +   +      IAL C      DRP++   V
Sbjct:  629 IIHRDLKAGNILLDADMNPKVADFGMARIFGM----DQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEII-SGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIV 777          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 49/148 (33.11%), Postives = 83/148 (56.08%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESAI---KNGSFADILDKSITDWPLAE-TEELACIALKCSNLRCRDRPDL 464
            I+HRD+K  NIL+D N+V+K+ D GL+K   +    ++T    T++ G+  Y+DPEY R   +  KSD+Y+FGV++ ++L +       LP   +   + A+   + G+  DI+D ++     AE  ++ A  A KC N    +RP +
Sbjct:  637 IIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVT----TVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTM 780          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 56/171 (32.75%), Postives = 86/171 (50.29%), Query Frame = 3
Query:   51 IVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLKVESAI---------KNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKLKDVADACVKLES 533
            IVHRD+K  N+LLD +  +KI D GLAKL  +        +  T +AGT+ YM PEY   G +  K+D+Y+FGV+ L++++         K E            + GS  +++D  + T +   E   +  IAL C+N     RP + + V  +  K+K V    VK E+
Sbjct:  789 IVHRDIKATNVLLDLSLNAKISDFGLAKLDEEE-----NTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIK-VQPPLVKREA 953          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS------CLPNGVLLKVESA---IKNGSFADILDKSI-TDWPLAETEELACIALKCSNLRCRDRPDLDTEVMPVLRKL 497
            H     PIVHRD++  N+LL  ++V+K+ D  L    ++A  D       T + GT  Y  PEY  TG I  KSD+Y+FGV++L+LLT        +P G    V  A   +        +D  +  D+P     +LA +A  C       RP++ T V+  L+ L
Sbjct:  193 HEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNL----TNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNM-TIVVKALQPL 353          
BLAST of CX296869 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13
Identity = 53/170 (31.18%), Postives = 91/170 (53.53%), Query Frame = 3
Query:   30 HNS*PEPIVHRDLKPGNILLDRNYVSKIGDVGLAKLISDAIPDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP---------NGVLLKVESAIKNGSFADILDKSITDWPLAETEEL--ACIALKCSNLRCRDRPDLDTEVMPVLRKLKDV 506
            H+S    I+HRD+K  N+LLD+++V+++ D G+A+L+S       T    + LAGT  Y+ PEY+++     K D+Y++GVI+L+LL+   P         N ++   +   +    A+ILD  +      + E L    IA +C + R   RP +  +VM + ++L  V
Sbjct:  974 HHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSAL----DTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTM-IQVMTMFKELVQV 1138          
The following BLAST results are available for this feature:
BLAST of CX296869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 183
Match NameE-valueIdentityDescription
ACCR4_ARATH9.279e-1428.26Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y2317_ARATH1.212e-1328.88Probable leucine-rich repeat receptor-like protein... [more]
MEE39_ARATH1.583e-1330.82Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH1.583e-1330.46LRR receptor-like serine/threonine-protein kinase ... [more]
Y1765_ARATH2.067e-1333.33Probable LRR receptor-like serine/threonine-protei... [more]
CRK23_ARATH2.067e-1333.12Putative cysteine-rich receptor-like protein kinas... [more]
ANX1_ARATH2.067e-1333.11Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5344_ARATH2.700e-1332.75Probable LRR receptor-like serine/threonine-protei... [more]
Y2197_ARATH2.700e-1332.53Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
BRL3_ARATH2.700e-1331.18Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC05803G02SK FerrChloL1 Citrus clementina cDNA clone C05803G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296869 ID=CX296869; Name=CX296869; organism=Citrus clementina; type=EST; length=755bp
CGAGGCCTCCTGCCGAATTCGGCACGAGGCACAACTCATAGCCAGAGCCT
ATTGTGCATCGAGACTTGAAACCGGGAAACATCTTGTTAGACAGAAATTA
TGTGAGCAAAATTGGGGATGTTGGGCTGGCTAAACTCATTTCAGATGCCA
TACCTGACAACATCACAGAGTACAGAGAGACCATTCTTGCTGGTACTCTT
CATTACATGGACCCAGAATATCACAGAACCGGCACTATTCGTCCCAAATC
TGATCTATATGCATTTGGAGTTATTATACTCCAGTTATTGACATCTTGCC
TTCCGAATGGAGTTCTACTGAAAGTTGAAAGTGCCATTAAGAATGGTTCC
TTTGCTGACATTTTAGACAAGTCAATAACAGATTGGCCGCTTGCTGAAAC
AGAGGAATTAGCTTGCATTGCATTAAAGTGTTCAAATCTTAGATGCAGAG
ATAGACCTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAG
GATGTTGCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACC
AAGCCACTTCTTCTGTCCAATCCTTCAGGTGAAAAGTCACAGTCAATTAC
AGAAACGTGATTTACAAGTTACATTTTCCATATTAGCTTGCATCTCATAT
AGATTTTTCTATTTGCTTCATCTTGGATAAATATAGGAAGTCATGGAAGA
TCCATACATTGCTGCTGATGGATTTACTTATGAGCATAGAGCAATCAAGG
CATGG
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