CX296871

Overview
NameCX296871
Unique NameCX296871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3029 contig Ccv1_Contig3029:823..1568. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.408e-24
Identity = 69/243 (28.40%), Postives = 132/243 (54.32%), Query Frame = 3
Query:   57 TRKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGE------QLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKES---KDFLQFLLQL----KDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            +R++C ++M  +  ++    +R+  + + +     +A S+ G GE       +FL   N++ NM++   +  D  +  G+EF   +  + E  G PN+SD FP L  FD+QGL KK      K  ++    I++R++ +R+ G+++   KD L  L+      KDE D    L+   +  ++++M + G++TTS+S E+A+ E++  P+ + + + E+ +V+G +   EE  I  LPY+ AV+
Sbjct:   88 SRRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSKDLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKKFIEERIE-ERKKGEKNRSIKDLLDVLIDFEGSGKDEPDK---LSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVL 326          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.676e-23
Identity = 70/230 (30.43%), Postives = 122/230 (53.04%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIY--TRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAV 743
            RK+  L ML    L++   +R+ +L   +  ++  ++    V + E L   + N+++ ++    V     A    EF+ +V E+    G  N+ DF P +   DLQG+    + L  KFD +   ++D   +  +E  K+  DFL F++   D +D +  L   ++KALL+++   G+DT+S+  E+A+AE++     + RAQ E+D V+GRD  + ES I  LPYL A+
Sbjct:  137 RKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSN-EFKDMVVELMTSAGYFNIGDFIPSIGWMDLQGIEGGMKRLHKKFDVLLTRLLDDHKRTSQE-RKQKPDFLDFVIANGDNSDGER-LNTDNIKALLLNLFTAGTDTSSSIIEWALAELLKNRTLLTRAQDEMDRVIGRDRRLLESDIPNLPYLQAI 363          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.070e-22
Identity = 59/238 (24.79%), Postives = 132/238 (55.46%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLK---------MDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+ ++++LS  ++ S  ++R  ++   +  I ++ G+ + + +++ L I  + T   +G   +  +      EF +++ ++T+ +  PN++D FP L    L   +  S+    K  K FD++++  LK         + +E G++ +D +  LL ++   D + PL   ++KA++ ++   G++T+S + ++AM EM+  P  +K+AQ+E+ +V   +  V+E+ +++L YL AV+
Sbjct:  124 RKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFGEKNKNTE------EFIRLLDQLTKAVAEPNIADMFPSLKFLQL---ISTSKYKIEKIHKQFDVIVETILKGHKEKINKPLSQENGEKKEDLVDVLLNIQRRNDFEAPLGDKNIKAIIFNIFSAGTETSSTTVDWAMCEMIKNPTVMKKAQEEVRKVFNEEGNVDETKLHQLKYLQAVI 352          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 64/235 (27.23%), Postives = 122/235 (51.91%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRA-----GSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESKDFLQFLLQLKDEA-DSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            R++C ++M  +  +     +RR+ +   + +I   A     GS + V   +FL   N++ N++    +  D  +   +EF   +  + E  G  NVSD FP L +FDLQ L KK      K  ++  + + +R +  ++  ++ KDFL  LL+ +    D    L+   +K  +++M + G++TTS+S E+A+ E++  PE + + + E+ + +  +   E+S I  LPY+ AV+
Sbjct:  131 RRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNMLGNLILSKDL-ADLESEEASEFFIAMKRINEWSGIANVSDIFPFLKKFDLQSLRKKMARDMGKAVEIMSMFLKEREEERKKGTEKGKDFLDVLLEFQGTGKDEPAKLSEHEIKIFVLEMFLAGTETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVL 364          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 68/185 (36.76%), Postives = 103/185 (55.68%), Query Frame = 3
Query:  213 NVITNMLWGGAVQGDDRASIG---AEFRQVVSEMTELLGTPN---VSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGK-ESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            N I  +++G      + A  G   AE  + +  M E LG      +SD+ P L   DL G  K  R      DK  D +ID R+KM RE  K + +DFL   + +KDE +    LT   +K  + ++V+   D  SN+ E+AMAEM+NKPE +++A +E+D VVG++ +V+ES I KL Y+ A++
Sbjct:  209 NAIKKLMFGTRTFSQNTAPNGGPTAEDIEHMEAMFEALGFTFSFCISDYLPILTGLDLNGHEKIMRDSSAIMDKYHDPIIDARIKMWREGKKTQIEDFLDIFISIKDE-EGNPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAIL 392          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C79B2_ARATH (Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.635e-21
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 3
Query:  330 VSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESK--DFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            +SD+ P L   DL G  K  R      DK  D +ID+R+KM RE GK ++  DFL   + +KDE  +   LT   +K  + ++V+   D  SN+ E+AMAEM+NKPE +++A +E+D VVG++ +V+ES I KL Y+ A++
Sbjct:  253 ISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWRE-GKRTQIEDFLDIFISIKDEQGNPL-LTADEIKPTIKELVMAAPDNPSNAVEWAMAEMVNKPEILRKAMEEIDRVVGKERLVQESDIPKLNYVKAIL 391          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.308e-20
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 3
Query:  330 VSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMIDQRLKMDRECGKESK--DFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            +SD+ P L   DL G  K  R      DK  D +ID+R+KM RE GK ++  DFL   + +KDEA     LT   +K  + ++V+   D  SN+ E+A+AEM+NKPE + +A +E+D VVG++  V+ES I KL Y+ A++
Sbjct:  255 ISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWRE-GKRTQIEDFLDIFISIKDEAGQPL-LTADEIKPTIKELVMAAPDNPSNAVEWAIAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAII 393          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20
Identity = 67/235 (28.51%), Postives = 121/235 (51.49%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFD-LQGLVKKSRALKNKFDKMFDLMIDQRLKMDR------ECGKESKDFLQFLLQLKDEA-DSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFA 740
            RK+C +++LS   + S++ +R  +++  +  I +  GS V + + +   I  + +   +G      +      EF   V E+ +L G  N++D FP     + L  +  K   L  K D++ + +ID      R      E G+E  D +  LL+ ++ + D    LT+ ++KA+L D+ + GS+T++ +  + MAEMM  P  +K+AQ E+ E+  R   V+E+ IY+L YL A
Sbjct:  116 RKICNVELLSMKRVQSLWPIREEEVKNLIQRIASEEGSVVNLSQAIDSLIFTITSRSAFGKRYMEQE------EFISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEYLHQKMDRILETIIDDHKANSRTKEGQVEGGEE--DLIDVLLKYENSSTDQDFHLTIRNIKAILFDIFIAGSETSATTINWTMAEMMKDPILLKKAQDEVREIFQRRGKVDETCIYELKYLKA 342          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20
Identity = 64/236 (27.12%), Postives = 126/236 (53.39%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAVQGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVK-KSRALKNKFDKMFDLMIDQ------RLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFAVM 746
            RK+C L++LS   + S   +R+ + ++ +  I++ AGS + +  +LF  +   ++   +G   + DD+     EF  +V +   + G   V D FP L    L    K K   +  + DK+ + ++ +      R+K       E +D +  LL+LK+    + P+TM ++KA++ ++   G+DT++++ E+AM+EMM  P+  ++AQ EL ++     I+ E+ + +L YL +V+
Sbjct:  132 RKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGSPIDLSGKLFSLLGTTVSRAAFGK--ENDDQD----EFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLLRLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGKEIIRETDLEELSYLKSVI 361          
BLAST of CX296871 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.446e-19
Identity = 72/233 (30.90%), Postives = 112/233 (48.07%), Query Frame = 3
Query:   60 RKVCVLKMLSNTTLDSVYALRRRQLRETVGYIYTRAGSTVGVGEQLFLTILNVITNMLWGGAV--QGDDRASIGAEFRQVVSEMTELLGTPNVSDFFPGLARFDLQGLVKKSRALKNKFDKMFDLMID----QRLKMDRECGKESKDFLQFLLQLKDEADSKTPLTMIHVKALLMDMVVGGSDTTSNSTEFAMAEMMNKPEGIKRAQQELDEVVGRDNIVEESHIYKLPYLFA 740
            RK+   ++ S   L +    R R     V +I T+ G  V +   LF   LNV+ ++++   V    D    +G +  +++  M    G  +V+ +FP LARFDL GL       K K D+ F L+I     + L        E KD L  L+                + A+ M+    GSDT SN  E+A+A+++  P+ + + ++ELD VVGR + V+ESH  +LPYL A
Sbjct:  128 RKILHTEIFSQKMLQAQEKNRERVAGNLVNFIMTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMD--KLIHGMLMTGGDFDVASYFPVLARFDLHGL-------KRKMDEQFKLLIKIWEGEVLARRANRNPEPKDMLDVLIA--------NDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQA 343          
The following BLAST results are available for this feature:
BLAST of CX296871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
C76A1_SOLME7.408e-2428.40Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C75A4_GENTR3.676e-2330.43Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71DC_CATRO1.070e-2224.79Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C76A2_SOLME5.309e-2227.23Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C79B1_SINAL1.545e-2136.76Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
C79B2_ARATH2.635e-2141.13Tryptophan N-hydroxylase 1 OS=Arabidopsis thaliana... [more]
C79B3_ARATH1.308e-2041.13Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C71DB_LOTJA3.804e-2028.51Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D8_SOYBN3.804e-2027.12Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C80A1_BERST1.446e-1930.90Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05803G04SK FerrChloL1 Citrus clementina cDNA clone C05803G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296871 ID=CX296871; Name=CX296871; organism=Citrus clementina; type=EST; length=746bp
GAAGCCTCGTGCCGAATTCGGCACGAGGCCTCGTGCCGAATTCGGCACCA
GGCGGCACGAGGAAAGTCTGTGTGCTCAAGATGCTCAGTAATACCACGTT
AGACTCCGTCTACGCGCTCCGTCGCCGTCAGCTCCGTGAGACTGTAGGTT
ATATTTACACTCGGGCCGGGTCAACCGTTGGCGTCGGTGAGCAACTGTTT
TTAACGATATTGAATGTGATAACGAACATGTTGTGGGGAGGCGCAGTGCA
AGGCGATGACAGGGCCAGCATTGGTGCGGAGTTTAGGCAAGTGGTGTCGG
AAATGACGGAGCTGTTGGGTACGCCCAATGTATCGGATTTCTTTCCCGGG
TTGGCCCGGTTCGACTTGCAAGGTTTGGTGAAGAAGTCGCGTGCGTTGAA
AAACAAGTTTGATAAGATGTTTGACCTGATGATTGATCAACGTCTGAAGA
TGGATAGAGAATGTGGGAAAGAGAGTAAAGATTTTCTGCAATTTCTGTTA
CAATTGAAGGATGAAGCTGATTCCAAGACACCTTTGACCATGATTCATGT
CAAAGCTCTGCTTATGGATATGGTGGTTGGTGGGTCAGATACAACCTCCA
ACTCAACTGAATTCGCCATGGCTGAAATGATGAACAAACCAGAAGGTATC
AAAAGAGCCCAGCAAGAATTGGACGAAGTTGTTGGCAGAGACAACATAGT
AGAAGAGTCCCACATTTACAAACTGCCATATCTATTTGCTGTAATG
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