CX296873

Overview
NameCX296873
Unique NameCX296873
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9358 contig Ccv1_Contig9358:732..1470. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LGMN_BOVIN (Legumain OS=Bos taurus GN=LGMN PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19
Identity = 65/237 (27.43%), Postives = 118/237 (49.79%), Query Frame = 3
Query:   24 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC----GSLTQYGMKHMRAFANICNS 722
            +P D+++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QYQ VK  T+        SHVM+YGN S+ + KL  +QG     A+ P +     ++ +    +  L  M     +  +  E +  ++++I   +  R  ++ S+  I  ++ G    +  ++ + ++  PL +   C ++ V  F +HC        +Y ++H+    N+C +
Sbjct:  198 LPPDINVYATTAANPRESSYACYYD-------EQRSTFLGDWYSVNWMEDSDVEDLTKETLHKQYQLVKSHTNT-------SHVMQYGNKSISAMKLMQFQGL-KHQASSPISLPAVSRLDLTPSPEVPLSIMKRKLMSTNDLQESR-RLVQKIDRHLEARNIIEKSVRKIVTLVSG---SAAEVDRLLSQRAPLTEH-ACYQTAVSHFRSHCFNWHNPTYEYALRHLYVLVNLCEN 414          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LGMN_RAT (Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19
Identity = 74/237 (31.22%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   24 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEML-KQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC---GSLT-QYGMKHMRAFANIC 716
            +P D+D+Y TTA+N  ESS+  Y          E  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN S+ + K+  +QG    +++  P  L P   + +    D  L  +    K     + K+S++L  QI   +  R  ++ S+  I  +L G   G      +  R +    D  C +  V  F THC    S+T ++ ++++   AN+C
Sbjct:  200 LPDDIDVYATTAANPNESSYACYYD-------EERSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKSISTMKVMQFQGMKHRASS--PISLPPVTHLDLTPSPDVPLTIL--KRKLLRTNNMKESQVLVGQIQHLLDARHIIEKSVQKIVSLLAG--FGETAQKHLSERAMLTAHD--CHQEAVTHFRTHCFNWHSVTYEHALRYLYVLANLC 414          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LGMN_MOUSE (Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19
Identity = 70/238 (29.41%), Postives = 117/238 (49.16%), Query Frame = 3
Query:   24 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC---GSLT-QYGMKHMRAFANICNS 722
            +P D+++Y TTA+N +ESS+  Y          E  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN S+ + K+  +QG    +++  P  L P   + +    D  L  +        +  E ++ ++ QI + +  R  ++ S+  I  +L G   G      +  R +    D  C +  V  F THC    S+T ++ ++++   AN+C +
Sbjct:  200 LPDDINVYATTAANPKESSYACYYD-------EERGTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKSISTMKVMQFQGMKHRASS--PISLPPVTHLDLTPSPDVPLTILKRKLLRTNDVKESQN-LIGQIQQFLDARHVIEKSVHKIVSLLAG--FGETAERHLSERTMLTAHD--CYQEAVTHFRTHCFNWHSVTYEHALRYLYVLANLCEA 416          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LGMN_PONAB (Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 67/236 (28.39%), Postives = 112/236 (47.46%), Query Frame = 3
Query:   24 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC----GSLTQYGMKHMRAFANIC 716
            +P ++++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN ++ + K+  +QG    +++  P  L P   + +    D  L  M     N  +  E+  ++ ++I + +  R  ++ S+  I  +L   +     L S  A   PL     C    +  F THC        +Y ++H+    N+C
Sbjct:  198 LPDNINVYATTAANPRESSYACYYD-------EKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKTISTMKVMQFQGMKHKASS--PISLPPVTHLDLTPSPDVPLTIMKRKLMNTND-LEESRQLTEEIQQHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERA---PLTGH-SCYPEALLHFRTHCFNWHSPTYEYALRHLYVLVNLC 412          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LGMN_MACFA (Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 67/236 (28.39%), Postives = 111/236 (47.03%), Query Frame = 3
Query:   24 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC----GSLTQYGMKHMRAFANIC 716
            +P ++++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN ++ + K+  +QG    +++  P  L P   + +    D  L  M     N  +  E+  ++ ++I   +  R  ++ S+  I  +L   +     L S  A   PL     C    +  F THC        +Y ++H+    N+C
Sbjct:  198 LPDNINVYATTAANPRESSYACYYD-------EKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKTISTMKVMQFQGMKHKASS--PLSLPPVTHLDLTPSPDVPLTIMKRKLMNTND-LEESRQLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERA---PLTGH-SCYPEALLHFRTHCFNWHSPTYEYALRHLYVLVNLC 412          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: LGMN_HUMAN (Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 67/236 (28.39%), Postives = 111/236 (47.03%), Query Frame = 3
Query:   24 MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYLYQGFDPASANFPPNKLQP-DQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHC----GSLTQYGMKHMRAFANIC 716
            +P ++++Y TTA+N +ESS+  Y          +  T LGD YSV WMEDS+  +L +ET+ +QY  VK  T+        SHVM+YGN ++ + K+  +QG    +++  P  L P   + +    D  L  M     N  +  E+  ++ ++I   +  R  ++ S+  I  +L   +     L S  A   PL     C    +  F THC        +Y ++H+    N+C
Sbjct:  198 LPDNINVYATTAANPRESSYACYYD-------EKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNT-------SHVMQYGNKTISTMKVMQFQGMKRKASS--PVPLPPVTHLDLTPSPDVPLTIMKRKLMNTND-LEESRQLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERA---PLTGH-SCYPEALLHFRTHCFNWHSPTYEYALRHLYVLVNLC 412          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: HGLB_SCHMA (Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17
Identity = 72/246 (29.27%), Postives = 117/246 (47.56%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYL--YQGF-DPASANFPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYGM--KHMRAFANICNSG 725
            GS+F+ ++P +L IY TTA+N+ E S+ T+C        P   TCL DLYS  W+ DS+TH+L + T+ QQY+ VK  T         SHV  YG+T  +  KLY+  +QG  D +S+      ++P     +  RD  L  + H        +E KS +++ +   ++ R  ++ ++ +I  ++        I N+       L     C +S+   F++ C +L Q      H     N C  G
Sbjct:  195 GSMFQQILPSNLSIYATTAANSTECSYSTFCGD------PTITTCLADLYSYNWIVDSQTHHLTQRTLDQQYKEVKRETDL-------SHVQRYGDT--RMGKLYVSEFQGSRDKSSSENDEPPMKPRHS--IASRDIPLHTL-HRQIMMTNNAEDKSFLMQILGLKLKRRDLIEDTMKLIVKVM----NNEEIPNTKATIDQTL----DCTESVYEQFKSKCFTLQQAPEVGGHFSTLYNYCADG 414          
BLAST of CX296873 vs. ExPASy Swiss-Prot
Match: HGLB_SCHJA (Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.027e-17
Identity = 69/248 (27.82%), Postives = 114/248 (45.97%), Query Frame = 3
Query:    3 GSIFEGVMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSHVMEYGNTSVKSEKLYL--YQGF-DPASANFPPNKLQPDQMGVVNQRDADLLFMWHMYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVGARGLPLVDDWQCLKSMVRVFETHCGSLTQYG--MKHMRAFANICNSGVS 731
            GS+F G++P D++IY TTA+   ESS+ T+C        P   +CL DLYS  W+ DSE H L + T+ QQY+ VK  T+        SHV  YG+   K  KLYL  +QG    AS       ++P     +  RD  L  + H     A     K+ ++K +   ++ R  +  ++++I   +F   + +            + +   C++ + + F++ C  + Q      ++    N C  G S
Sbjct:  189 GSMFAGLLPTDINIYATTAARPDESSYATFCDD------PRISSCLADLYSYDWIVDSEKHQLTQRTLDQQYKEVKFETNL-------SHVQRYGDK--KMGKLYLSEFQGSRKKASTEHDEPPMKPKDS--IPSRDIPLHTL-HRRIMMANNMNDKTLLMKILGLKLKRRDLIKDTMEVIDQFMFNVKQPN--------SNATIDETMDCIEVVYKEFQSKCFKIQQAPEITGYLSTLYNYCQKGYS 410          
The following BLAST results are available for this feature:
BLAST of CX296873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
LGMN_BOVIN1.082e-1927.43Legumain OS=Bos taurus GN=LGMN PE=1 SV=1[more]
LGMN_RAT2.411e-1931.22Legumain OS=Rattus norvegicus GN=Lgmn PE=2 SV=1[more]
LGMN_MOUSE7.014e-1929.41Legumain OS=Mus musculus GN=Lgmn PE=1 SV=1[more]
LGMN_PONAB3.481e-1828.39Legumain OS=Pongo abelii GN=LGMN PE=2 SV=1[more]
LGMN_MACFA5.938e-1828.39Legumain OS=Macaca fascicularis GN=LGMN PE=2 SV=1[more]
LGMN_HUMAN7.755e-1828.39Legumain OS=Homo sapiens GN=LGMN PE=1 SV=1[more]
HGLB_SCHMA1.013e-1729.27Hemoglobinase OS=Schistosoma mansoni PE=1 SV=3[more]
HGLB_SCHJA5.027e-1727.82Hemoglobinase OS=Schistosoma japonicum GN=HAEM PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05803G06SK FerrChloL1 Citrus clementina cDNA clone C05803G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296873 ID=CX296873; Name=CX296873; organism=Citrus clementina; type=EST; length=739bp
GTGGTAGCATTTTTGAAGGTGTAATGCCCAAAGATCTAGATATATATGTC
ACTACTGCATCAAATGCACAAGAGAGCAGCTTTGGGACTTATTGCCCTGG
AATGGATCCTTCTCCACCTCCAGAGTACATCACTTGCTTGGGGGATTTGT
ACAGTGTTGCTTGGATGGAGGACAGTGAGACTCACAATTTGAAGAGAGAG
ACCATAAGTCAACAGTATCAAGCTGTGAAGGAACGGACTTCCAATTTTAA
CAATTACAATTCTGGATCTCATGTGATGGAATATGGGAACACAAGCGTCA
AATCAGAGAAGCTATACTTGTATCAAGGTTTCGATCCTGCCAGCGCCAAC
TTTCCTCCGAACAAGCTTCAGCCTGATCAAATGGGAGTTGTCAACCAGAG
AGACGCAGATCTTCTCTTCATGTGGCATATGTACAAAAATGCAGCAGAGG
GATCAGAAAAGAAATCAGAAATGCTTAAGCAGATTACAGAGACAATGAGG
CACAGAAAACACTTAGATGCAAGTATTGATATGATTGGAGTAATTTTATT
TGGACCAGATAAGGGTTCTAGAATTCTTAATTCCGTTGGAGCACGTGGCC
TGCCTCTTGTTGATGACTGGCAATGCCTGAAATCAATGGTTCGTGTTTTC
GAGACTCACTGTGGGTCACTCACTCAATATGGCATGAAACACATGAGGGC
ATTTGCCAATATCTGCAACAGTGGTGTGTCCCAGCCTTG
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