CX296875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.869e-21 Identity = 68/193 (35.23%), Postives = 99/193 (51.30%), Query Frame = -2 Query: 121 DHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 693 + Y + +VD LIQ+GLTL D +G + GG WE NF DF + DA SIE LR G+D + R+EG+ F M +++WVTFH +YD YL+K T +LP + F + G ++YD+K + C+ L GL+ +A ++R VG H AGS++ LT F K+ Sbjct: 35 ERYMDMSFSVDRAKLIQLGLTLFDINGRI-----GGT----WEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLG-SVYDLKVMAGRCEGLSSRLGLETLAHEFGLNR-VGTAHHAGSNNELTAMVFAKV 215
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20 Identity = 68/192 (35.42%), Postives = 92/192 (47.92%), Query Frame = -2 Query: 121 YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTR-RSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 687 Y+ +K NVD +LIQ+G TL D G WE N DFD SI L+ G++ ++ R+EG+ F + ++WV F +YD YLVK LT + LP +EF ++ G ++DVK I C L GL R+A L + R VGK H AGSDS LT F K+ Sbjct: 54 YRDMKFNVDNTHLIQLGFTLFDRRGFAKT----------WEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKR-VGKAHHAGSDSELTARVFTKL 234
BLAST of CX296875 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.224e-18 Identity = 66/192 (34.38%), Postives = 90/192 (46.88%), Query Frame = -2 Query: 121 YKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTR-RSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVARTLDVSRAVGKCHQAGSDSLLTWHAFQKI 687 Y+ +K NVD +LIQ+G TL D G WE N DF+ SI L+ G++ ++ +EG+ F + ++WV F +YD YLVK LT + LP +EF + G ++DVK I C L GL R+A L + R VGK H AGSDS LT F K+ Sbjct: 49 YRDMKFNVDNTHLIQLGFTLFDRRGITKT----------WEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKR-VGKAHHAGSDSELTARVFTKL 229 The following BLAST results are available for this feature:
BLAST of CX296875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296875 ID=CX296875; Name=CX296875; organism=Citrus clementina; type=EST; length=745bpback to top |