CX296876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 45/99 (45.45%), Postives = 57/99 (57.58%), Query Frame = -3 Query: 286 SGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 582 S G G ++ + ++ K RV ++ DI D Y WRKYGQK +KG+P PR YYKC T GC RKHVERA DP +I TYEG+H+H Sbjct: 193 SSNGDGKDIGEDETEAKRWKREENVKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-TFTGCFVRKHVERAFQDPKSVITTYEGKHKH 290
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.902e-17 Identity = 43/77 (55.84%), Postives = 50/77 (64.94%), Query Frame = -3 Query: 286 KTIRVPAISSKI---ADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 507 K IR P + + DI D Y WRKYGQK ++G+P PR YYKC T GCP RKHVERA DP +I TYEG+H H Sbjct: 362 KPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKC-TAHGCPVRKHVERASHDPKAVITTYEGKHDH 437
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17 Identity = 51/130 (39.23%), Postives = 65/130 (50.00%), Query Frame = -3 Query: 235 KDHSDDLSGKFSGSTSGNNKCHCSKRRK----NRVKKTIRVPAI---SSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENAAPAGVGLV 603 KDH DD + SK R+ + +T+ P I + D+ D Y WRKYGQK +KG+P+PR YYKC+T C RKHVERA D +I TYEG+H H A + A A V Sbjct: 256 KDHDDD-----DDDDEDDEDLPASKIRRIDGVSTTHRTVTEPKIIVQTKSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTT-PNCTVRKHVERASTDAKAVITTYEGKHNHDVPAARNGTAAATAAAV 379 HSP 2 Score: 72.4034 bits (176), Expect = 2.811e-12 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = -3 Query: 223 DIPPDE-YSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQ------AAMQENAAPAGVGLVFEST 468 D P D+ Y+WRKYGQKPIKG YPR YYKC T CP +K VER+ D I+ Y+G+H H + +++ G G + ES+ Sbjct: 163 DKPADDGYNWRKYGQKPIKGCEYPRSYYKC-THVNCPVKKKVERSSDGQITQII-YKGQHDHERPQNRRGGGGRDSTEVGGAGQMMESS 249
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 259 KRRKNRVK---------KTIRVPAI---SSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENA 531 KRR V+ +T+ P I ++ D+ D Y WRKYGQK +KG+PYPR YYKC+T C RKHVERA DP ++ TYEG+H H A + ++ Sbjct: 379 KRRNTEVRVSEPVASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSS 480 HSP 2 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = -3 Query: 286 ADIPPDE-YSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 471 AD P D+ Y+WRKYGQK +KGS +PR YYKC T CP +K VER+ D I+ Y+G+H H Sbjct: 245 ADKPADDGYNWRKYGQKQVKGSDFPRSYYKC-THPACPVKKKVERSLDGQVTEII-YKGQHNH 305
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = -3 Query: 286 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 534 +K++ + + R ++ D D Y WRKYGQK +K SPYPR YY+C+T+ GC +K VER+ DDP++++ TYEG+H H Sbjct: 196 AKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTV-GCGVKKRVERSSDDPSIVMTTYEGQHTH 277
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = -3 Query: 286 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 534 SKRRKN + + + S +D D + WRKYGQK + G+ YPR YY+C T C ARKHVERA DDP I TYEG+H H Sbjct: 324 SKRRKNEKQSSEAGVSQGSVESDSLEDGFRWRKYGQKVVGGNAYPRSYYRC-TSANCRARKHVERASDDPRAFITTYEGKHNH 405 HSP 2 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = -3 Query: 280 DEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQ 456 D Y+WRKYGQK +KGS PR YYKC T CP +K VER+ + IV Y+GEH HS+ Sbjct: 166 DGYNWRKYGQKQVKGSECPRSYYKC-THPKCPVKKKVERSVEGQVSEIV-YQGEHNHSK 222
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16 Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = -3 Query: 286 KRRKNRVKKTI--RVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 531 K +K VKK RV ++ D D Y WRKYGQK +K SPYPR YY+C+T + C +K VER+ DPT++I TYEG+H H Sbjct: 146 KTKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPTVVITTYEGQHNH 228
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = -3 Query: 286 RRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 528 ++K KK RV ++ D D Y WRKYGQK +K SPYPR YY+C+T + C +K VER+ DPT++I TYE +H H Sbjct: 160 KKKEEKKKEPRVSFMTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSYQDPTVVITTYESQHNH 239
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16 Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = -3 Query: 283 SKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHS 534 +K+ K ++K + S ++ D + WRKYG+K +K SP+PR YYKCS + GCP +K VER DDP+ +I TYEG H HS Sbjct: 90 NKKEKKKIKGRVAFKTRSE--VEVLDDGFKWRKYGKKMVKNSPHPRNYYKCS-VDGCPVKKRVERDRDDPSFVITTYEGSHNHS 170
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 48/107 (44.86%), Postives = 58/107 (54.21%), Query Frame = -3 Query: 247 SKRRK-----------NRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENAAPAG 534 SKRRK R + RV ++ DI D Y WRKYGQK +KG+P PR YYKC T GC RKHVERA D +I TYEG+H H A + ++ G Sbjct: 451 SKRRKLEAFAAEMSGSTRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKC-TAPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHGGG 556 The following BLAST results are available for this feature:
BLAST of CX296876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296876 ID=CX296876; Name=CX296876; organism=Citrus clementina; type=EST; length=731bpback to top |