CX296876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16 Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = -3 Query: 286 RRKNRVKKTIRVPA---ISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 528 + K + +K IR P ++ D D Y WRKYGQK +K SP+PR YY+C+ R C +K VER+ DDP+++I TYEG+H H Sbjct: 121 KEKKKAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR-CTVKKRVERSSDDPSIVITTYEGQHCH 203
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.148e-16 Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = -3 Query: 250 SDDLSGKFSGSTSGNNKCHCSKRR--------KNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAM---QENAAPA 594 S+ ++G G + H +K+R K KK +V I+ D Y WRKYGQKP+K SP+PR YY+C+T C +K VER+ DP+ +I TYEG+H H + + +E ++P+ Sbjct: 65 SEAVNGDDEEEEDGEEQQHKTKKRFKFTKMSRKQTKKKVPKVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCTT-TWCDVKKRVERSFSDPSSVITTYEGQHTHPRPLLIMPKEGSSPS 189
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.335e-16 Identity = 52/140 (37.14%), Postives = 69/140 (49.29%), Query Frame = -3 Query: 241 YKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRK-----------NRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENAAPAGVG 627 Y+ +D + +S + G + SKRRK R + RV ++ DI D Y WRKYGQK +KG+P PR YYKC T GC KHVERA DD ++ TY G+H H A + N++ G G Sbjct: 309 YRDENEDDRTSHMSVSLTYDGEVEESE----SKRRKLEAYATETSGSTRASREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-TANGCTVTKHVERASDDFKSVLTTYIGKHTHVVPAAR-NSSHVGAG 442
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = -3 Query: 244 SGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDE-YSWRKYGQKPIKGSPYPRGYYKCSTMR--GCPARKHVERAPDDPTMLIVTYEGEHR--HSQAAMQENAAPAGV 558 SG++ +R+ ++T+ V A+ + D+PPD+ ++WRKYGQK I GS +PR YY+C+ + CPA+K V+R DDP VTY G H +S A +A P+ + Sbjct: 139 SGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTCYNSTAPTASSATPSTI 248
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = -3 Query: 283 HSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKI---ADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHS 597 H D S +T+ K +K + ++ +R P K D+ D Y WRKYGQK +K + +PR YY+C T C +K VER DDP M+I TYEG H HS Sbjct: 174 HHDTPSRHDKHNTASLGVVSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRC-TQDKCRVKKRVERLADDPRMVITTYEGRHLHS 280
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = -3 Query: 286 PYKKRCQDHKDHSDDLSGKFSGST--SGNNKCHCSKRRKNRVKK-------------------TIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 630 P KKR QD + G SG T S +N+ H +++ K T+ VP +S + D + WRKYGQK + +P PR Y++CS CP +K V+R+ +DP++L+ TYEG H H Sbjct: 98 PIKKRKQDPDEFLGFPIGLSSGKTENSSSNEDHHHHHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNH 233
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = -3 Query: 235 DEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENAAPAGVGLV 456 D Y WRKYGQK +KG+P+PR YY+C T GCP RKH+E A ++ +I+TY+G H H ++ P LV Sbjct: 332 DGYRWRKYGQKMVKGNPHPRNYYRC-TSAGCPVRKHIETAVENTKAVIITYKGVHNHDMPVPKKRHGPPSSMLV 404
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 43/131 (32.82%), Postives = 70/131 (53.44%), Query Frame = -3 Query: 286 PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 678 P + ++S+ A K + +D+++ G+ S K +K+ + ++ RV ++ D D Y WRKYGQK +K SP+PR YY+C+T C +K VER+ DP+ ++ TYEG+H H Sbjct: 106 PNSSSISSASSE-ALNEEKPKTEDNEEEG----GEDQQEKSHTKKQLKAKKNNQKRQREARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTT-ASCNVKKRVERSFRDPSTVVTTYEGQHTH 230
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = -3 Query: 253 STSGNNKCHCSKRRKNRVKKTIRVPAISSKIA---DIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENAAP 564 S + NN H K + K+T+ + I+ D+ D Y WRKYGQK +K + +PR YY+C T C +K V+R DP +++ TYEG H H + E +P Sbjct: 76 SNNSNNSDHNKNCNKGKGKRTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRC-TYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLSP 181
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = -3 Query: 286 KDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 603 K H+ +GS + ++K + ++K RV + A + D WRKYGQK KG+P PR YY+C+ GCP RK V+R +D T+LI TYEG H H Sbjct: 245 KHHASSSICGGNGSENASSKVIEQAAAEATMRKA-RVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNH 349 The following BLAST results are available for this feature:
BLAST of CX296876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296876 ID=CX296876; Name=CX296876; organism=Citrus clementina; type=EST; length=731bpback to top |