CX296876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 42/116 (36.21%), Postives = 58/116 (50.00%), Query Frame = -3 Query: 286 DDLSGKFSGSTSGNNKCHCSK-----------RRKNRVKKTIRVPAI---SSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 591 +D F G T NN H + + K ++++ +R P + D+ D Y WRKYGQK +K S +PR YY+C T C +K VER +D M+I TYEG H H Sbjct: 89 NDDQENFGGGT--NNDAHSNSWWRSNSGSGDMKNKVKIRRKLREPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRC-THNNCRVKKRVERLSEDCRMVITTYEGRHNH 201
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = -3 Query: 214 RKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQENAAPAGVGLVFEST*EN 525 ++ R +K R+ + D+ D Y WRKYGQK +K + +PR YY+C T C +K V+R DP +++ TYEG H H + E P L F S+ N Sbjct: 76 KEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRC-TYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLSSFSN 178
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 37/90 (41.11%), Postives = 53/90 (58.89%), Query Frame = -3 Query: 286 NKCHCSKRRKNRVKKTIRVPAISSKIAD--IPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 549 +K KR++++ I V S I + D Y WRKYG+KPI GSP+PR Y+KCS+ C +K +ER ++P ++ TYEG H H Sbjct: 77 DKDEIKKRKRHKEDPIIHVFKTKSSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCSS-PDCNVKKKIERDTNNPDYILTTYEGRHNH 165
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRKY1_DICDI (Probable WRKY transcription factor protein 1 OS=Dictyostelium discoideum GN=wrky1 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.648e-12 Identity = 40/105 (38.10%), Postives = 54/105 (51.43%), Query Frame = -3 Query: 286 DHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 600 + D+ + + + NN + S + N S+ I++I D Y WRKYGQK +KGS +PR YYKC T +GC RK VER D Y+GEH H Sbjct: 767 NEEDEENNSTQNNNNNNNNNNNSPQNSNTNSNNSNNSNNSNNISNIVSDGYQWRKYGQKNVKGSLHPRHYYKC-TFQGCNVRKQVERI-GDTNQNSTVYKGEHCH 869
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = -3 Query: 283 DEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHS 456 D Y WRKYGQK + +P PR Y++CS C +K V+R+ +DP+ L+ TYEG H H+ Sbjct: 147 DGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHT 204
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK49_ARATH (Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 286 TIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 504 T++V S+ + D D Y WRKYGQK IK SP PR YYKC T C A+K VER+ D+ I+TYEG H H Sbjct: 102 TLKVKNNSNGMCD---DGYKWRKYGQKSIKNSPNPRSYYKC-TNPICNAKKQVERSIDESNTYIITYEGFHFH 170
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = -3 Query: 286 VKKTIRVP-AISSKIADIPP--DEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRH 513 V K ++ P + I+DI D + WRKYGQK +KG+ PR YYKC T +GC +K VER+ D ++ TYEG H H Sbjct: 307 VSKGVKEPRVVVQTISDIDVLIDGFRWRKYGQKVVKGNTNPRSYYKC-TFQGCGVKKQVERSAADERAVLTTYEGRHNH 384
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 38/106 (35.85%), Postives = 51/106 (48.11%), Query Frame = -3 Query: 262 GKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQAAMQEN 579 G+ S + C S + K R + DI D Y WRKYGQK +K + +PR YY+C T GC +K V+R D +++ TYEG H H EN Sbjct: 27 GEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC-TYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTEN 131
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 39/88 (44.32%), Postives = 53/88 (60.23%), Query Frame = -3 Query: 280 SKRRKNRVKKTIRVPAISSKIADIPPDE-YSWRKYGQKPIKGSPYPRGYYKCS--TMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQ 534 SK+RK K T +V + + P D+ +SWRKYGQK I G+ +PR YY+C+ + C A K V+R+ DPT+ VTY G H SQ Sbjct: 115 SKKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFEVTYRGTHTCSQ 202
BLAST of CX296876 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = -3 Query: 277 PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKNRVKKTIRVPAISSKIADIPPDE-YSWRKYGQKPIKGSPYPRGYYKCS--TMRGCPARKHVERAPDDPTMLIVTYEGEHRHSQA 678 P++PA G P R ++ D G S S + SK+RK K + +V + + P D+ +SWRKYGQK I G+ +PR YY+C+ + + C A K V+R+ D T+ VTY G H SQA Sbjct: 98 PESPASINGSP---------RSEEFAD-----GGGSSESHHRQDYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHTCSQA 220 The following BLAST results are available for this feature:
BLAST of CX296876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296876 ID=CX296876; Name=CX296876; organism=Citrus clementina; type=EST; length=731bpback to top |