CX297491

Overview
NameCX297491
Unique NameCX297491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig594 contig Ccv1_Contig594:233..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.369e-88
Identity = 148/237 (62.45%), Postives = 188/237 (79.32%), Query Frame = 1
Query:   13 EAVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSDPL 723
            +  +SKSPNKHNR+Y++A P++E ++ AI+ G+I PRDD KAR++++++E+GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVV+ FQWA+KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFP  VFDHW  ++SDPL
Sbjct:  573 QVALSKSPNKHNRIYLKAEPMDEEVSLAIEQGKINPRDDFKARARVMADEYGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVSAFQWATKEGPILGETMRSVRVNILDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPL 809          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.040e-88
Identity = 149/237 (62.87%), Postives = 187/237 (78.90%), Query Frame = 1
Query:   13 EAVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSDPL 723
            +  +SKSPNKHNR+Y++A P++E ++ AI++G I PRDD KAR++I+++++GWD   A+KIWCFGP+  GPN+V+D  K VQYL+EIKDSVVA FQWA+KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFP  VFDHW  + SDPL
Sbjct:  573 QTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDARKIWCFGPDGNGPNLVIDQTKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPL 809          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.176e-87
Identity = 147/237 (62.03%), Postives = 188/237 (79.32%), Query Frame = 1
Query:   13 EAVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSDPL 723
            +  +SKSPNKHNR+Y++A+P++E ++ AI+ G+I PRDD KAR++++++E+GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVV+ FQWA+KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFP  VFDHW  + +DPL
Sbjct:  573 QVALSKSPNKHNRIYLKAQPIDEEVSLAIEGGKINPRDDFKARARVMADEYGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVSAFQWATKEGPIFGEQMRSVRINLLDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPL 809          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.535e-87
Identity = 151/232 (65.09%), Postives = 186/232 (80.17%), Query Frame = 1
Query:   22 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717
            +SKSPNKHNR+Y++A+P++E ++  I++G I PRDD KAR++IL+++ GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR AT GQAFP  VFDHW ++S D
Sbjct:  576 LSKSPNKHNRIYVKAQPIDEEVSLDIENGIINPRDDFKARARILADKHGWDVAEARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGD 807          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 2.619e-87
Identity = 150/232 (64.66%), Postives = 185/232 (79.74%), Query Frame = 1
Query:   22 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717
            +SKSPNKHNR+Y++A+P++E ++  I++G I PRDD KAR++IL+++ GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  EN R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFP  +FDHW +MS D
Sbjct:  576 LSKSPNKHNRIYVKAQPIDEEVSLDIENGVINPRDDFKARARILADKHGWDVVDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENCRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGD 807          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.834e-87
Identity = 149/233 (63.95%), Postives = 184/233 (78.97%), Query Frame = 1
Query:   22 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSDP 720
            +SKSPNKHNR+Y++A+P++E ++  I+ G I PRDD KAR++IL++  GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR +T GQAFP  +FDHW  ++ DP
Sbjct:  576 LSKSPNKHNRIYVKAQPIDEEVSLDIEKGVINPRDDFKARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDP 808          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.619e-87
Identity = 149/234 (63.68%), Postives = 190/234 (81.20%), Query Frame = 1
Query:   22 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSDPL 723
            +SKS NKHNR+Y++A+P++E L+ AI++G++ PRDD KAR++I+++E+GWD   A+KIWCFGP+ TG N+VVD  K VQYL+EIKDSVVAGFQ A+KEG +  ENMR +   + DV LHADAIHRGGGQVIPT +RV YA+ L A+P + EP+++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT+GQAFP  VFDHW  M+ +PL
Sbjct:  576 LSKSQNKHNRIYLKAQPIDEELSLAIEEGKVHPRDDFKARARIMADEYGWDVTDARKIWCFGPDGTGANLVVDQSKAVQYLHEIKDSVVAGFQLATKEGPILGENMRSVRVNILDVTLHADAIHRGGGQVIPTMKRVTYAAFLLAEPAIQEPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPL 809          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 2.804e-81
Identity = 142/227 (62.56%), Postives = 180/227 (79.30%), Query Frame = 1
Query:   22 MSKSPNKHNRLYMEARPLEEGLAEAIDDGR-IGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHW 699
            +SKSPNKHNRL+M+A P+   L + I+ G  I  +DDPKAR+  L++   WDK+ A  IW FGPE  G N++V++ KGVQYLNEIKDS V  FQWA+KEG + +ENMRGI F + DV LH DAIHRGGGQ+IPTARRV+YA++LTA P LLEP+Y+VEI APE A+GGIYSVLN++RG V  E +R G+PL+++KA+LPV+ESFGF+  LR+ T+GQAFP CVFDHW
Sbjct:  574 LSKSPNKHNRLFMKASPISMELQDLIEAGSDISSKDDPKARANYLADNHEWDKNDAMNIWSFGPEGNGANLLVNVTKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW 800          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.428e-79
Identity = 136/232 (58.62%), Postives = 173/232 (74.57%), Query Frame = 1
Query:   22 MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717
            +SKS N  NRL+M A P  EGLAE I+ G I P  D K R+K LSE++GWD D A+KIWCFGP+  GPN+ VD+ KG+QYLNE+KDS+V GF  A  +G +  E +RG+   + DV LHADAIHRGG Q+IP ARR  +A  LT  P LLEP+Y+ EIQ PE A+GGIY+V++++RG +  E QRPGTPL+N++AYLPV ESFGF+  LR+ TSGQAFP CVFDHW +++ D
Sbjct:  574 LSKSANNQNRLFMRAFPFPEGLAEDIEAGEIKPDTDFKERAKFLSEKYGWDVDEARKIWCFGPDNCGPNLFVDVTKGIQYLNEVKDSIVNGFNNAMHDGVVCNEQIRGVRINLEDVKLHADAIHRGGAQMIPCARRCCFACVLTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPGTPLFNVRAYLPVCESFGFTADLRSHTSGQAFPQCVFDHWQLLNGD 805          
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.480e-70
Identity = 125/238 (52.52%), Postives = 166/238 (69.75%), Query Frame = 1
Query:   13 EAVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMS-SDPL 723
            E  ++KSPNKHNRLY+   P+ +GLA+ I+D ++ P  + K R++ +S  +G D +L +KIW FGP   GPN+  +   GVQYLNEIK+SVVAGF  A   G + +E  R +  ++ DV LHAD+IHRG GQ++P ARRV+  + L A+P L+EPV++ EIQ P    GGIY VL ++RGHVFEE+   GTP+ NIK+YLPV ESFGF+  LR AT+GQAFP CVF HW   +  DPL
Sbjct:  597 EPGLAKSPNKHNRLYVNVEPMPDGLAQEIEDQKVTPEQEFKERARYMSTTYGMDVELMRKIWAFGPNGNGPNIFCEATHGVQYLNEIKESVVAGFGAACAAGPIVDEPCRNVLCKLMDVTLHADSIHRGMGQIMPPARRVVLGTMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPL 834          
The following BLAST results are available for this feature:
BLAST of CX297491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
EF2_CANGA2.369e-8862.45Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_YEAST4.040e-8862.87Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_ASHGO1.176e-8762.03Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_PICGU1.535e-8765.09Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_CANAL2.619e-8764.66Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_DEBHA5.834e-8763.95Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_PICPA7.619e-8763.68Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_DICDI2.804e-8162.56Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_ENTHI3.428e-7958.62Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_BLAHO6.480e-7052.52Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC06002A10SK RindPdig24 Citrus clementina cDNA clone C06002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297491 ID=CX297491; Name=CX297491; organism=Citrus clementina; type=EST; length=725bp
CGAATTCGGCACGAGGCTGTGATGAGTAAGTCTCCCAACAAGCATAATCG
TCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTGCTGAGGCCATAG
ATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCTCGATCTAAGATC
TTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAAGAAGATTTGGTG
TTTTGGTCCTGAGACCACTGGCCCTAACATGGTCGTTGATATGTGTAAGG
GAGTTCAATACTTGAATGAAATTAAGGATTCTGTTGTTGCTGGTTTCCAG
TGGGCATCGAAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAGGTATCTG
CTTTGAAGTATGTGATGTTGTTCTTCACGCTGATGCCATTCACAGAGGTG
GTGGTCAAGTCATTCCTACTGCTAGGAGGGTCATATATGCTTCCCAGCTC
ACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAATACAGGC
TCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAATCAGAAACGTG
GTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACAACATC
AAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCACTTTGAG
GGCTGCAACGTCAGGACAGGCCTTCCCCACATGTGTGTTTGATCACTGGG
ACATGATGTCATCCGATCCACTGGA
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