CX297491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.104e-36 Identity = 76/220 (34.55%), Postives = 133/220 (60.45%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEF---GWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQ 669 V KSPNKHNR Y+E P+E + +AI +G+I + + + K +++ F G DK+ A+++W + N+ ++M +G+QYL+EIK+ ++ GF+ A G +A+E + G+ ++ D +H DA+HRG QV+P R+ I+ + ++A+P LLEP+ V I P+ +G + +RG + Q + +++ +PV E FGF+G +R+AT G+ Sbjct: 477 VEGKSPNKHNRFYIEIEPVEASVMQAIQEGKI---KEGRVKGKEMAKNFIEAGMDKEEARRVW----DVYEKNLFINMTRGIQYLDEIKELLMDGFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGR 687
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.122e-36 Identity = 79/217 (36.41%), Postives = 127/217 (58.53%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQ 669 V KSPNKHNR Y+ PLE+ L +A+ +G++ S E+G DK+ A+K+W + ++ ++ +G+QYL+E+K+ ++ GF+ A +G LA+E G+ F++ D LH DA+HRG QV+P R IYAS ++A P LLEP+ V I P+ +G + +RG + + Q + I++ +PV E FGF+G +R+A G+ Sbjct: 477 VEGKSPNKHNRFYITVEPLEDELFKALQEGKLKEGKVKGKESANDFMEYGLDKEEARKVW----DVYNRSVFINATRGIQYLDEVKELLIEGFESALNDGPLAKEIAMGLKFKLHDAKLHEDAVHRGPAQVLPAIRNAIYASMMSAGPTLLEPMQKVFINTPQDYMGPCTREIQNRRGQIVDMGQE--GDMATIESKVPVAEMFGFAGDIRSAAEGR 687
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.781e-35 Identity = 81/220 (36.82%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEF---GWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQ 669 V KSPNKHNR Y++ PL + L AI +G I + + + K L++ F G DKD AKK+W + ++ V+ +G+QYL+EIK+ ++ GF+ A +G LA E GI + D +H DA+HRG QV+P R+ +Y + + A+P L+EP+ V I P+ +G + +RG + E Q + I++ +PV E FGF+G +R+A G+ Sbjct: 477 VEGKSPNKHNRFYIDIEPLSDDLMNAISEGEI---PEGRVKGKELAKTFQEHGLDKDEAKKVW----DVYKHSIFVNKTRGIQYLDEIKELLMEGFESALDDGPLANEKAMGIKISLMDAKIHEDAVHRGPAQVLPAIRKAVYGAIMLAQPTLMEPMQKVYISVPQDYMGAATREVQNRRGQIVEMGQE--GDMSTIESKVPVSEMFGFAGDIRSAAEGR 687
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_THEON (Elongation factor 2 OS=Thermococcus onnurineus (strain NA1) GN=fusA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.038e-35 Identity = 89/220 (40.45%), Postives = 126/220 (57.27%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQA 672 V KSPNKHNR Y+ PL + + EAI +G I G DPKA +K L+E G D ++AK I + N+ +D KG+QYLNE+ D +V GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G LR ATSG+A Sbjct: 476 VEGKSPNKHNRFYITVEPLPDAIYEAIREGEIPEGRPKDPKAVAKKLAE-LGLDYEIAKGI----VDVYNGNIFLDNTKGIQYLNEVMDLLVDGFHQAMDEGPLAKEPVMKVMVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGSVSREINQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGALRGATSGKA 688
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.968e-35 Identity = 88/230 (38.26%), Postives = 126/230 (54.78%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMM 708 V KSPN+HNR Y+E P++ + + I DG I R L G DKD AK + E T NM +DM KG+QYLNE + V+ G++ A + G LA+E ++ + + DV LH DAIHRG QVIP R + A L A LLEP+ ++I P + +G S + +RG VF+ + T I PV E FGF+G +R+AT G+A + F ++++ Sbjct: 478 VEGKSPNRHNRFYIELEPMDPAIVKMILDGEISMNQQAIERRDALVAA-GMDKDEAKNVKAI--EAT--NMFIDMTKGIQYLNETMELVLDGWREALRGGPLADELVQNLKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGVLMAGDSLLEPIQKIQITVPSEQMGAATSQIQGRRGQVFDMLSEGDT--MTIVGKAPVAELFGFAGDIRSATEGRAMWSTEFAGFELV 700
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_PYRKO (Elongation factor 2 OS=Pyrococcus kodakaraensis GN=fusA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.182e-35 Identity = 89/223 (39.91%), Postives = 126/223 (56.50%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPT 681 V KSPNKHNR Y+ P+ + + +AI +G I G DPKA +K L+E G D ++AK I + NM +D KG+QYLNE+ D +V GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + LNQ+RG + +M++ G + I PV E FGF+G +R ATSG+A T Sbjct: 476 VEGKSPNKHNRFYITVEPMPDEIYQAIREGEIPEGRPKDPKAVAKKLAE-LGMDYEIAKGI----VDIYNGNMFLDNTKGIQYLNEVMDLLVDGFHQAMDEGPLAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRSAIHCAMMKAGPVLYEPYQKVIINVPYEYMGAVSRELNQRRGQLI-DMRQEGEVMI-IIGEAPVAEMFGFAGAIRGATSGKALWT 691
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.182e-35 Identity = 89/235 (37.87%), Postives = 123/235 (52.34%), Query Frame = 1 Query: 13 EAVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSD 717 E V KSPN+HNR Y PL E + I G I R +L + G DKD AK + G NM++DM KG+QYLNE + ++ G A G LA+E ++ + + DV LH DAIHRG QVIP R I L A LLEPV ++I P +G S + +RG VF +MQ G + + PV E FGF+G +R+AT G+A F ++++ ++ Sbjct: 476 EDVEGKSPNRHNRFYFTLEPLPEEIVNLIKAGEITMNQQAIERRDVLLKA-GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELIIEGINEALAGGPLADEPVQNLKMTLTDVKLHEDAIHRGPAQVIPAVRGAIKGGMLIAGDSLLEPVQKIQISVPMDQMGAATSQIQGRRGQVF-DMQSEGDTI-TVVGKAPVAELFGFAGDIRSATEGRAMWNTEFAGFELVPNN 703
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.359e-34 Identity = 85/220 (38.64%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQA 672 V KSPNKHNR Y+ P+ + + +AI +G I G DPKA +K L+E G D D+A+ + + NM +D KG+QYLNE+ D ++ GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + ++Q+RG + +M++ G + I A PV E FGF+G +R+ATSG+A Sbjct: 476 VEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLAE-LGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQLI-DMRQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRA 688
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.359e-34 Identity = 85/220 (38.64%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 19 VMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQA 672 V KSPNKHNR Y+ P+ + + +AI +G I G DPKA +K L+E G D D+A+ + + NM +D KG+QYLNE+ D ++ GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + ++Q+RG + +M++ G + I A PV E FGF+G +R+ATSG+A Sbjct: 476 VEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLAE-LGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQLI-DMRQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRA 688
BLAST of CX297491 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.387e-34 Identity = 89/238 (37.39%), Postives = 131/238 (55.04%), Query Frame = 1 Query: 13 EAVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPTCVFDHWDMMSSDPL 723 E + KSPN+HNR Y+ A PL+ + AI +G + + + R K++ + G +K+ AK I N+ +DM KG+QYLNE + V+ GF+ + G L E + + + D LH DAIHRG Q+IP AR+ I A L A+ LLEP V +Q P+ +GG L +RG + M G L I+A +PV E FGF+G +R+AT G+A + F +D++ S L Sbjct: 475 EPIEGKSPNRHNRFYIYAEPLDTEIVSAIKEGEVSMNLPELERRQKLI--DLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPAARQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMTTEG-DLAIIEARVPVAEMFGFAGEIRSATEGRAMWSTEFGGFDVVPSSIL 704 The following BLAST results are available for this feature:
BLAST of CX297491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297491 ID=CX297491; Name=CX297491; organism=Citrus clementina; type=EST; length=725bpback to top |