CX297498

Overview
NameCX297498
Unique NameCX297498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.214e-29
Identity = 73/201 (36.32%), Postives = 109/201 (54.23%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV-LLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            F+  ELR  T NF  DRVL       VYKG     L +G        KV D D       E++ E++ L  ++H N+VKL+G C E E  +L+YE++  G +   L  +     + W +R++IA   A  L ++H A   P+ +RD KT+NILLD  Y A +SDFG ++     D++H++T + GT+GY  PEY ++   T
Sbjct:  417 FSSKELRKATDNFSIDRVLGQGGQGTVYKGM----LVDGSIVAVKRSKVVDEDKM----EEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSR-SVTLDQTHLTTLVAGTFGYMDPEYFLSSQYT 608          

HSP 2 Score: 26.9498 bits (58), Expect = 4.214e-29
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  698 QSDVYSFGVVLLEI 739
            +SDVYSFGVVL+E+
Sbjct:  610 KSDVYSFGVVLVEL 623          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.450e-29
Identity = 84/207 (40.58%), Postives = 118/207 (57.00%), Query Frame = 3
Query:   99 FTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFL-----GHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFL-HEAEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            FTY ++   T+NF ++RV+       VY+G +  D RE      VAVK    + + +  +E+ AE+  L     G  +HPNLV+L G+C +   ++L++E+M  GS+E  +  K    L W  R+ IA   A+GL FL HE    +++RD K SN+LLD   NA ++DFGLA+    GD SHVST I GT GY APEY  T   T R
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLP-DGRE------VAVKKLQREGT-EAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKT--KLQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGD-SHVSTVIAGTIGYVAPEYGQTWQATTR 997          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.448e-29
Identity = 80/199 (40.20%), Postives = 110/199 (55.28%), Query Frame = 3
Query:   87 PLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF--SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEY 674
            PL   T+ +L   T  F  D ++       VYK      L++G   V +   +H    S QG RE+ AE+  +G + H NLV L+GYC   E R+L+YE+M  GS+E+ L    K  + L W  R KIA GAA+GLAFLH    P +I+RD K+SN+LLD +  A +SDFG+A+     D     + + GT GY  PEY
Sbjct:  872 PLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKA----QLKDG-SVVAIKKLIHV---SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEY 1062          

HSP 2 Score: 26.1794 bits (56), Expect = 5.448e-29
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            +++ DVYS+GVVLLE+
Sbjct: 1069 STKGDVYSYGVVLLEL 1084          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 5.452e-29
Identity = 73/198 (36.87%), Postives = 108/198 (54.55%), Query Frame = 3
Query:   93 IAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPLPWSIRMKIAFGAAKGLAFLHEAEKP-VIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMT 683
            +  T+D +   T NF    ++        YK  IS+D+   ++ + +          +QG +++ AE+  LG L HPNLV LIGY   +    L+Y ++  G++E   F +      W +  KIA   A+ LA+LH+   P V++RD K SNILLD D NA LSDFGLA+     + +H +T + GT+GY APEY MT
Sbjct:  860 VPITFDNVVRATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIG--------RFQGVQQFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEK--FIQERSTRDWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSE-THATTGVAGTFGYVAPEYAMT 1046          

HSP 2 Score: 26.1794 bits (56), Expect = 5.452e-29
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  692 NSQSDVYSFGVVLLEI 739
            + ++DVYS+GVVLLE+
Sbjct: 1050 SDKADVYSYGVVLLEL 1065          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 5.492e-29
Identity = 75/210 (35.71%), Postives = 108/210 (51.43%), Query Frame = 3
Query:   72 DSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKV-LLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLT 695
            D A    +   Y  ++  T +F +   +       VYKG  S           VAVK     NS QG  E+  EV+ +  L H NLV+L+G+  + E R+L+YE+M   S++  LF       L W  R  I  G A+G+ +LH+  +  +I+RD K SNILLD D N  ++DFG+A+          ++RI+GTYGY APEY M G  +
Sbjct:  332 DMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKE-------VAVK-RLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFS 533          

HSP 2 Score: 28.1054 bits (61), Expect = 5.492e-29
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  + +SDVYSFGV++LEI
Sbjct:  530 GQFSMKSDVYSFGVLVLEI 548          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.153e-29
Identity = 74/212 (34.91%), Postives = 110/212 (51.89%), Query Frame = 3
Query:   72 DSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVLLPL-PWSIRMKIAFGAAKGLAFLHE-AEKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            DS    ++ F    + + T +F  +  L       VYKG              VAVK      S QG  E+  EV  L  L H NLVKL+G+C E +  +L+YEF+   S+++ +F +    L  W +R +I  G A+GL +LHE ++  +I+RD K SNILLD + N  ++DFG A+     +    + RI GT GY APEY+  G ++ +
Sbjct:  327 DSDGQFMLRFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQE-------VAVK-RLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAK 530          

HSP 2 Score: 30.8018 bits (68), Expect = 7.153e-29
Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  677 NDGSSNSQSDVYSFGVVLLEI 739
            N G  +++SDVYSFGV+LLE+
Sbjct:  523 NHGQISAKSDVYSFGVMLLEM 543          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.305e-29
Identity = 74/234 (31.62%), Postives = 117/234 (50.00%), Query Frame = 3
Query:    6 RHEEKEYGKLPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL-LPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            R   + YG   S  +  +DL   S +   + F +  ++  T+NF +   L       VYKG              VA K      S QG  E+  EV+ +  L H NLV L+G+  E E ++L+YEF+   S+++ LF  +  + L W  R  I  G  +G+ +LH+  +  +I+RD K SNILLD + N  ++DFGLA++         + R++GT+GY  PEY+  G  + +
Sbjct:  324 RRPRRPYGTA-SPDDATDDLTASSGS---LRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTE-------VAAK-RLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTK 545          

HSP 2 Score: 29.6462 bits (65), Expect = 9.305e-29
Identity = 12/20 (60.00%), Postives = 18/20 (90.00%), Query Frame = 2
Query:  680 DGSSNSQSDVYSFGVVLLEI 739
            +G  +++SDVYSFGV++LEI
Sbjct:  539 NGQFSTKSDVYSFGVLILEI 558          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.914e-29
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 3
Query:  105 YDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFSKVL---LPLPWSIRMKIAFGAAKGLAFLHEA-EKPVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTG 686
            Y +L   T  F+++R++       V++G +S    +      +AVK     NS QG RE++AE+  LG L H NLV L G+C +    +LIY+++  GS+++ L+S+     + L W+ R KIA G A GL +LHE  EK VI+RD K SN+L++ D N  L DFGLA+    G +S+ +T ++GT GY APE    G
Sbjct:  351 YKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSD-----QIAVKKIT-PNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSN-TTVVVGTIGYMAPELARNG 541          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.914e-29
Identity = 80/205 (39.02%), Postives = 113/205 (55.12%), Query Frame = 3
Query:   93 IAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLF-SKVLLPLPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            + F+Y+ L   T  F     L       VYKG ++           VAVK     N+ Q    +  EV  +  + H NLVKL+G        +L+YE++A  S+ + LF  K + PL W+ R KI  G A+G+A+LHE     +I+RD K SNILL+ D+   ++DFGLA+  PE DK+H+ST I GT GY APEY++ G LT +
Sbjct:  309 LCFSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKT-------VAVK-RLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPE-DKTHISTAIAGTLGYMAPEYVVRGKLTEK 504          
BLAST of CX297498 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.578e-28
Identity = 78/243 (32.10%), Postives = 119/243 (48.97%), Query Frame = 3
Query:    3 IRHEEKEYGKLPSNPEEVEDLRRDSAANPLIAFTYDELRIITANFRQDRVLXXXXXXCVYKGFISEDLREGLQPVPVAVKVHDGDNSYQGHREWLAEVIFLGHLSHPNLVKLIGYCCEDEHRVLIYEFMARGSVENNLFS---KVLLP------LPWSIRMKIAFGAAKGLAFLHEAEK-PVIYRDFKTSNILLDTDYNAXLSDFGLAKDGPEGDKSHVSTRIMGTYGYAAPEYIMTGHLTPR 701
            IR   + Y  L    ++      D  +   + F +  L   T  F ++  L       VYKG +  +         VAVK     NS QG +E+  EV+ +  L H NLV+L+G+C E + ++L+YEF+   S+   LF    K LL       L W  R  I  G  +GL +LH+  +  +I+RD K SNILLD D N  ++DFG+A++         + R++GT+GY  PEY+  G  + +
Sbjct:  283 IRKRRQSYKTLKPKTDD------DMTSPQSLQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETE-------VAVK-RLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTK 511          

HSP 2 Score: 29.261 bits (64), Expect = 1.578e-28
Identity = 12/19 (63.16%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  683 GSSNSQSDVYSFGVVLLEI 739
            G  +++SDVYSFGV++LEI
Sbjct:  506 GQFSTKSDVYSFGVLILEI 524          
The following BLAST results are available for this feature:
BLAST of CX297498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
WAKLA_ARATH4.214e-2936.32Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
Y1743_ARATH4.450e-2940.58Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE5.448e-2940.20Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
RPK2_ARATH5.452e-2936.87LRR receptor-like serine/threonine-protein kinase ... [more]
CRK8_ARATH5.492e-2935.71Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK40_ARATH7.153e-2934.91Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK21_ARATH9.305e-2931.62Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
LRKA2_ARATH9.914e-2939.39Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK3_ARATH9.914e-2939.02Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK32_ARATH1.578e-2832.10Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC06002B05SK RindPdig24 Citrus clementina cDNA clone C06002B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297498 ID=CX297498; Name=CX297498; organism=Citrus clementina; type=EST; length=745bp
GAATTCGGCACGAGGAAAAGGAATACGGTAAGTTACCATCAAATCCGGAA
GAAGTAGAGGACCTGCGTCGTGATTCGGCTGCAAATCCATTGATTGCATT
CACGTACGATGAACTGAGAATCATCACTGCAAATTTCAGGCAAGATCGTG
TGTTGGGTGGAGGCGGATTTGGATGTGTTTACAAAGGGTTCATTTCTGAG
GACTTAAGGGAAGGGCTTCAGCCTGTTCCAGTGGCTGTTAAGGTTCATGA
TGGTGATAACAGTTATCAAGGCCACCGGGAATGGCTGGCAGAAGTCATAT
TTTTGGGACACCTTTCTCATCCGAATTTGGTTAAGTTGATCGGTTACTGC
TGTGAAGATGAACACCGGGTACTAATATATGAGTTCATGGCTCGGGGTAG
TGTCGAAAACAATCTTTTCTCAAAAGTACTGCTTCCTCTTCCATGGTCTA
TCAGAATGAAGATTGCATTTGGTGCTGCAAAAGGACTGGCCTTCCTTCAT
GAAGCAGAGAAACCTGTCATCTATCGCGACTTTAAGACATCTAATATTCT
CTTAGATACGGACTACAATGCANAGCTCTCGGACTTTGGCCTTGCCAAAG
ATGGACCAGAGGGGGACAAATCTCACGTTTCAACTCGCATAATGGGAACT
TATGGATATGCAGCCCCTGAGTACATAATGACGGGTCATCTAACTCCCAG
AGTGATGTGTACAGCTTTGGTGTCGTGCTTCTTGAGATCTGACAG
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