CX297531

Overview
NameCX297531
Unique NameCX297531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 64/199 (32.16%), Postives = 103/199 (51.76%), Query Frame = 1
Query:   58 FKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTK---GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ++   V+ R+K    K+   E L   +  +   +TK     I + ++  I+ ++ VA ++T++ +++W +AEL  HP + KK++ E+   +G    +T  D   L Y++ VIKET RL    P+L+P   + + K+ GYD+   ++I VNAW +  NP  WK              S VE  G  F  LPFG GRR CP
Sbjct:  254 YQKAIVDHREK---KKTEDREDLIDVLLKLQSQETKLGSSRITDTHIRAIIMDLFVAGVDTSVITLDWTMAELSRHPRVMKKVQAEIREHVGDKGIVTYDDLEALVYMKMVIKETWRLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWK--DPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCP 447          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 62/205 (30.24%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   31 EVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            E  ++R   F +  V+E +        + ++    +D +L  Q+    ++  +  I+ ++ +A   T+L  +EW + EL+ +P++ KKL+ E+ +    G  +TE +  K+ YLQAVIKE LRLR   PL+VP +   D  L GY++PA +++++NAW +  +   W               S ++  G DF+++PFG G+R CP
Sbjct:  241 EEVDKRFDEFLERVVKEHE------DANKDTRSDLVDTLLTIQS----DKSALKLIIWDMFLAGTATSLSFLEWAMTELMRNPKVMKKLQEEIRSSSRQGLFVTEKEAEKMDYLQAVIKEALRLRPPAPLMVPRVFSEDVTLKGYNIPAGTQVIINAWAIQRDTTTW-GIDAEEFRPERHLDSILDFQGQDFKFIPFGSGKRICP 434          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23
Identity = 58/178 (32.58%), Postives = 98/178 (55.06%), Query Frame = 1
Query:  136 IDHILDAQTKGE-------INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +D +LD   K E       +  D++  I+ +I +A + T+  ++ W +AEL+ +P + KK+++E+ T LG   Q ITE D  ++ Y + V+KE  RL  A PLL+P   +   K+ GYD+P ++++++N + +A +P  W               S ++  G +F  LPFG GRR CP
Sbjct:  272 VDVMLDLMKKQEKDGESFKLTTDHLKGIISDIFLAGVNTSAVTLNWAMAELIRNPRVMKKVQDEIRTTLGDKKQRITEQDLSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTN--PDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICP 447          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 58/182 (31.87%), Postives = 103/182 (56.59%), Query Frame = 1
Query:  112 SNESLKCAIDHILDAQTKGE---INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            S++ +   ID +   + +G+      D++  ++ +I +A + T+  ++ W + EL+ +P + KK+++E+ T LG   + ITE D ++L Y + ++KE  RL  A PLL+P   L   K+ GYD+PA+++I++NA+ +A +P  W               S ++  G +F  LPFG GRR CP
Sbjct:  262 SSDIIDVMIDMMKKQEKEGDSFKFTTDHLKGMISDIFLAGVGTSSTTLIWAMTELIRNPRVMKKVQDEIRTTLGDKKERITEEDLNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTN--PDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 64/195 (32.82%), Postives = 105/195 (53.85%), Query Frame = 1
Query:  103 KSMSNESLK------CAIDHILDAQTKGEINEDNVLY-------IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +++ NE LK        +D ++D + K E + D + +       ++ +I VA I        WG+ EL+ +P + KK+++E+ T LG   + I E D ++L Y + V+KETLRL    PLL+P   +   K+ GYDVPA+++ILVN + +  +P  W+              S V+  G ++ ++PFG GRR CP
Sbjct:  249 QNVLNEHLKPGRESSTIVDLMIDMKKKQENDGDALKFTTDHLKGMISDIFVAGIGGVAGITLWGMTELIRNPRVMKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWEN--ADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 55/159 (34.59%), Postives = 88/159 (55.35%), Query Frame = 1
Query:  169 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            EI+   +  IV ++ VA  +++   ++W + EL+ HPE  + L+ E+ T+      ++E D   + YL+AVIKET RL   +PLL PH ++ D  LG Y +PA +++++NAW +    A W               S V+  G++F  +PFG GRR CP
Sbjct:  276 EIDRLCIKAIVLDVLVAGTDSSYALMDWAMTELLRHPECLRTLQEEVRTICKGNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATW-GPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICP 433          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23
Identity = 62/198 (31.31%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   64 DYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE---INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            DY ++  +K+A     S++ +   I+ I   +  G+   +  D++  ++ +I +A + T+  ++ W I ELV + ++ KK++ E+ T LG   + ITE D   L Y + V+KE  RL  A+P L+P   L   K+ GYD+PA+++I++N + +A +P  W               S ++  G +F  LPFG GRR CP
Sbjct:  250 DYHLKPGRKVAD----SSDIIDVVINMIKKQEKDGDSFKLTTDHLKGMISDIFLAGVSTSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTN--PDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23
Identity = 61/210 (29.05%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   34 VKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTK------GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            ++ RR +  KD  V  ++     K  + + ++  +D +L  + +      G++  ++V  I+ N+ + AI T+  ++ W +AEL+ +P + KK+++E+   +     IT  D   LPYL+ VIKET RL   +PLL+P   + + ++ GY +  ++ + VN W +  +P  WK              + ++A G +F  LPFG GRR CP
Sbjct:  234 LQRRREKSVKDLDVFYQQMFDLHKQENKQGVEDFVDLLLKLEKEETVLGYGKLTRNHVKAILMNVLLGAINTSAMTMTWAMAELIRNPRVMKKVQSEIRNQMINKSVITLDDIDHLPYLKMVIKETWRLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWK--DADMFYPERFMDNNIDAKGQNFELLPFGSGRRICP 441          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23
Identity = 54/170 (31.76%), Postives = 90/170 (52.94%), Query Frame = 1
Query:  136 IDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            +    D Q   ++  DN+  I+ ++     ET   +IEW + EL+  PE  K+++ EL  V+G   ++ E D  KL YL+  +KETLR+   IPLL+ H    D  + G+ +P +S++++NA+ +  +P  W                  +  G++F ++PFG GRRSCP
Sbjct:  292 VSETADLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWALTELLRSPEDLKRVQQELAEVVGLDRRVEESDIEKLTYLKCTLKETLRMHPPIPLLL-HETAEDTSIDGFFIPKKSRVMINAFAIGRDPTSW-TDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCP 459          
BLAST of CX297531 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23
Identity = 57/156 (36.54%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  181 DNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGH-QITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXXSKVEANGNDFRYLPFGVGRRSCP 645
            D+V  IV +  + AI+T+  +I W ++EL+  P++ +K + E+   +G    ++   D  K+PYL+ V+KETLRL     LLVP   + D  + GYDVPA +++ VNAW +  +PA W               S V+  G+ F  +PFG GRR CP
Sbjct:  316 DHVKAIVLDTFIGAIDTSSVTILWAMSELMRKPQVLRKAQAEVRAAVGDDKPRVNSEDAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTTICGYDVPANTRVFVNAWAIGRDPASW--PAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICP 469          
The following BLAST results are available for this feature:
BLAST of CX297531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
C71B6_ARATH8.880e-2432.16Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AJ_ARATH8.880e-2430.24Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH1.160e-2332.58Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH1.515e-2331.87Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71BF_ARATH1.515e-2332.82Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.515e-2334.59Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH1.978e-2331.31Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.978e-2329.05Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH2.584e-2331.76Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71E1_SORBI2.584e-2336.544-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06002E04SK RindPdig24 Citrus clementina cDNA clone C06002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297531 ID=CX297531; Name=CX297531; organism=Citrus clementina; type=EST; length=712bp
TTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTAAAGAAAGGAGACT
CCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAGAAATTGGCAAGCA
CGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAATCGATCATATTTTG
GACGCTCAGACAAAGGGAGAAATCAACGAGGACAACGTTCTATACATCGT
TGAGAACATCAATGTTGCCGCGATCGAGACAACTCTTTGGTCGATCGAGT
GGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCAGAAGAAGCTCCGC
AATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAATCACTGAGCCTGA
CACCCACAAACTACCCTACCTTCAGGCCGTGATCAAGGAAACTCTTCGCC
TTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAACCTTCACGACGCC
AAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAATCCTAGTGAACGC
GTGGTGGCTCGCCAACAATCCCGCCCAATGGAAGAAACCTGAAGAATTCA
GGCCTGAGAGGTTTTTGGAGGAGGAGTCCAAGGTTGAGGCTAATGGAAAT
GACTTCCGTTACCTTCCTTTCGGTGTTGGGAGAAGAAGCTGCCCTGGATT
ATCCTTGCTTTGCCAATTCTTGGTATCACTATTGGGCGTTTGGTACAGAA
CTTTGAGCTCTT
back to top