CX297566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 3.129e-53 Identity = 76/126 (60.32%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH ++ F+TN G+I+F WDT GQ+KFGGL DGYYI QC I MFDVT+R+TY +VP WHRDL RVCENIPIVLCGNKV V V +TFHRKKNLQYY+I A++ F L L G Sbjct: 43 EVHPLA-FYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAG 167 HSP 2 Score: 68.9366 bits (167), Expect = 3.129e-53 Identity = 31/39 (79.49%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 67 DYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 + P+FKLV+VGDGG+GKTTFVKRHLTGEF+KKY TIGV Sbjct: 4 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGV 42
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: GSP1_NEUCR (GTP-binding nuclear protein GSP1/Ran OS=Neurospora crassa GN=gsp-1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 4.078e-53 Identity = 77/126 (61.11%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + F TN G+I+F WDT GQ+KFGGL DGYYI GQC I MFDVT+R+TY +VP WHRDL RVCENIPIVLCGNKV V V +TFHRKKNLQYY+I A++ F L L+G Sbjct: 43 EVHPLG-FSTNFGQIQFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVG 167 HSP 2 Score: 68.1662 bits (165), Expect = 4.078e-53 Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 73 PSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 P+FKLV+VGDGG+GKTTFVKRHLTGEF+KKY T+GV Sbjct: 6 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYMATLGV 42
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: GSP1_CANGA (GTP-binding nuclear protein GSP1/Ran OS=Candida glabrata GN=GSP1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.931e-53 Identity = 76/126 (60.32%), Postives = 88/126 (69.84%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH ++ F TN G+I+F WDT GQ+KFGGL DGYYI QC I MFDVT+R+TY +VP WHRDL RVCENIPIVLCGNKV V V +TFHRKKNLQYY+I A++ F L L G Sbjct: 43 EVHPLA-FHTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAG 167 HSP 2 Score: 69.3218 bits (168), Expect = 6.931e-53 Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 61 TVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 + + P+FKLV+VGDGG+GKTTFVKRHLTGEF+KKY TIGV Sbjct: 2 SAEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGV 42
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 9.034e-53 Identity = 76/126 (60.32%), Postives = 90/126 (71.43%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + F TN G IRF WDT GQ+KFGGL DGYYI+GQCA+ MFDVT+R+TY +VP WHRDL RVCENIPIVLCGNKV + + V + FHRKKNLQYY+I A++ F L L+G Sbjct: 46 EVHPLI-FHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVG 170 HSP 2 Score: 67.3958 bits (163), Expect = 9.034e-53 Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 67 DYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 D P+FK V+VGDGG+GKTTFVKRH+TGEF+KKY T+GV Sbjct: 7 DIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGV 45
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: GSP1_CANAL (GTP-binding nuclear protein GSP1/Ran OS=Candida albicans GN=GSP1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.535e-52 Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 2 Query: 206 FFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 F TN G+++F WDT GQ+KFGGL DGYYI GQC I MFDVT+R+TY +VP WHRDL RVCENIPIVLCGNKV V V +TFHRKKNLQYY+I A++ F L L+G Sbjct: 49 FHTNFGELKFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVG 167 HSP 2 Score: 68.1662 bits (165), Expect = 1.535e-52 Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 67 DYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 + P+FKLV+VGDGG+GKTTFVKRHLTGEF+KKY T+GV Sbjct: 4 EVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGV 42
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN_ONCVO (GTP-binding nuclear protein Ran OS=Onchocerca volvulus GN=ran-1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 5.778e-52 Identity = 79/126 (62.70%), Postives = 90/126 (71.43%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + F TN G+IRF WDT GQ+KFGGL DGYYI+GQCAI MFDVTAR+TY +VP WHRDL RVCENIPIVLCGN V V + V +TFHRKKNLQYY+I A++ L LLG Sbjct: 45 EVHPLI-FHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNFVDVKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPSLWLVRKLLG 169 HSP 2 Score: 65.0846 bits (157), Expect = 5.778e-52 Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 67 DYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 D P+FKLV+VGDGG+GKTTFVKRHLTG+ +KKY T+GV Sbjct: 6 DIPTFKLVLVGDGGTGKTTFVKRHLTGDPEKKYVATLGV 44
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN4_ARATH (GTP-binding nuclear protein Ran-4 OS=Arabidopsis thaliana GN=RAN4 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.279e-51 Identity = 70/120 (58.33%), Postives = 83/120 (69.17%), Query Frame = 2 Query: 203 DFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 DFFTN GKIRF CWDT GQ+K+ GL D YYI GQCAI MFDVTAR TY ++ W+RDL RVC+NIPIVLCGNKV V + + V++HRKK LQYYE+ A+ F L + G Sbjct: 54 DFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIVLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAG 173 HSP 2 Score: 76.6406 bits (187), Expect = 1.279e-51 Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN Q VD P+FKL+IVGDGG+GKTTF+KRHLTGEF+ EPT+GV Sbjct: 3 LPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGV 48
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RANT_MOUSE (GTP-binding nuclear protein Ran, testis-specific isoform OS=Mus musculus GN=Rasl2-9 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.280e-51 Identity = 78/126 (61.90%), Postives = 92/126 (73.02%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + F TN G I+F WDT GQ+KFGGL DGYYI+ QCAI MFDVT+R+TY +VP+WH+DL RVCENIPIVLCGNKV V +M V + FHRKKNLQYY+I AR+ FF L L+G Sbjct: 46 EVHTLV-FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDVKDMKVKAKPILFHRKKNLQYYDISARSNYNFEKPFFWLARKLIG 170 HSP 2 Score: 61.2326 bits (147), Expect = 1.280e-51 Identity = 26/35 (74.29%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 79 FKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 FK+V+VGDGG+GKTTF+KRHLTGEF+K+Y T+GV Sbjct: 11 FKVVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGV 45
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RANT_RAT (GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus GN=Rasl2-9 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.668e-51 Identity = 76/126 (60.32%), Postives = 92/126 (73.02%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + F TN G I+F WDT GQ+KFGGL DGYYI+ QCAI MFDVT+R+TY +VP+WH+DL RVCENIPIVLCGNKV + +M V + FHRKKNLQYY+I A++ FF L L+G Sbjct: 46 EVHTLV-FHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDIKDMKVKAKPILFHRKKNLQYYDISAKSNYNFEKPFFWLARKLIG 170 HSP 2 Score: 62.3882 bits (150), Expect = 1.668e-51 Identity = 27/35 (77.14%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 79 FKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 FKLV+VGDGG+GKTTF+KRHLTGEF+K+Y T+GV Sbjct: 11 FKLVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGV 45
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: GSP1_YARLI (GTP-binding nuclear protein GSP1/Ran OS=Yarrowia lipolytica GN=GSP1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.669e-51 Identity = 80/132 (60.61%), Postives = 91/132 (68.94%), Query Frame = 2 Query: 167 NRPLV*EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 N L EVH ++ F T+CG IRF WDT GQ+KFGGL DGYYI GQC I MFDVT+R+TY +VP WHRDL RVCENIPIVLCGNKV V V +TFHRKKNLQYY+I A++ F L L G Sbjct: 37 NATLGVEVHPLN-FATDCGNIRFDVWDTAGQEKFGGLRDGYYINGQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAG 167 HSP 2 Score: 59.3066 bits (142), Expect = 1.669e-51 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 76 SFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 +FKLV+VGDGG+GKTTFVKRH TGEF +Y T+GV Sbjct: 7 AFKLVLVGDGGTGKTTFVKRHETGEFVNRYNATLGV 42 The following BLAST results are available for this feature:
BLAST of CX297566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297566 ID=CX297566; Name=CX297566; organism=Citrus clementina; type=EST; length=631bpback to top |