CX297679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 12 LQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPS----------SEPGVTCKGVPNSVSI 326 L PS Q+ +A++D LSTHS DEEY+G ++P W+ DG I +AF EF N+DP R+NR GAG++PY LL PS E V G+PNS+SI Sbjct: 823 LDTFPSQYQSAIVLAILDLLSTHSSDEEYMGTHEEP-AWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +L+ + Q ++V++ LS H+ DE YLGER P W+ D EAF F N+D RNRCG +PY LL+PSS+ G+T +G+PNS+SI Sbjct: 753 YLKTITPKFQTLIDLSVIEILSRHASDEVYLGERDNP-NWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRR-NRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +L+ + S L ++V++ LSTH+ DE YLG+R P W+ D + +AF +F N+DPS + NR G LPY LL PSSE G+T +G+PNS+SI Sbjct: 734 YLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +L+ + + ++V++ LS H+ DE YLGER+ P W+ D + EAF F NSDPS RNR G LPY LL SSE G+T KG+PNS+SI Sbjct: 760 YLRTITPKFETLIDLSVIEILSRHASDEIYLGERETP-NWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 3 Query: 51 MAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 + +++ LS H+ DE+YLGER + W+ D EAF F N+D S RNR G +PY LL PSSE G+TC+G+PNS+SI Sbjct: 775 LTIIEVLSRHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI 866
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 FL+ + + LQ +++++ LSTHS DE YLG+R W+ + E EAF +F N D + +NR G +PY LL PSSE GVT +G+PNSVSI Sbjct: 755 FLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKE-WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.910e-14 Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +L+ + S Q ++V++ LS H+ DE YLG+R P W+ D + +AF +F N+D S NR G LPY LL P+SE G+TC+G+PNS+SI Sbjct: 762 YLRTITSKFQTLVDLSVIEILSRHASDEVYLGQRDNPH-WTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE-GLTCRGIPNSISI 865
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.483e-14 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +L+ + Q ++V++ LS H+ DE YLG+R+ P W+ D + +AF +F N+DPS +R G LPY LL PSS+ G+T +G+PNS+SI Sbjct: 760 YLRTITPKFQTLIDLSVIEILSRHASDEVYLGQRENPH-WTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKEGLTFRGIPNSISI 864
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.444e-13 Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 +L+ + Q ++V++ LS H+ DE YLGER P W+ D EAF +F N+D RNR G +PY LL PSS+ G+T +G+PNS+SI Sbjct: 757 YLKTITPKFQTLIDLSVIEILSRHASDELYLGERDNP-NWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIPNSISI 861
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 FL+ + + + V++ LS H+ DE YLG+R W+ D EAF F N D + RNR G +PY LL PSSE G+T +G+PNS+SI Sbjct: 748 FLKTITGKKETLIDLTVIEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853 The following BLAST results are available for this feature:
BLAST of CX297679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297679 ID=CX297679; Name=CX297679; organism=Citrus clementina; type=EST; length=719bpback to top |