CX297679
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12 Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSE------PGVTCKGVPNSVSI 326 F++ + S LQ +++++ LS HS DE YLG+R P W+ D EAF FS N D +NR G PY LL P++ G+T KG+PNS+SI Sbjct: 756 FIRTITSQLQTIIGISLIEVLSKHSSDEVYLGQRDTP-AWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 43/111 (38.74%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSS-----EPGVTCKGVPNSVSI 326 FL+ + LQ +++++ LS HS DE YLG+R P W+ D E EAF F N+D +NR G +PY LL P++ E G+T KG+PNSVSI Sbjct: 777 FLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSP-NWTADDEPLEAFKRFGKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI 886
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 FL+ + + LQ +++V+ LS H+ DE YLG+R+ P W+ D E AF F N D NR G PY LL P+SE G+T KG+PNSVSI Sbjct: 757 FLKTITAQLQTLLGVSLVEILSRHTTDEIYLGQRESPE-WTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 861
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 3 Query: 6 YFLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSE------PGVTCKGVPNSVSI 326 +F++ + S Q +++++ LS HS DE YLG+R P W+ D + EAF FS N DP +NR G PY L+ P++ G+T +G+PNS+SI Sbjct: 752 FFIRTITSQFQTILGVSLIEILSKHSADEIYLGQRDTPE-WTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12 Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSE------PGVTCKGVPNSVSI 326 F++ + +QA +++++ LS HS DE YLG+R P W+ D + EAF F N DP R+NR G PY LL P++ G++ +G+PNS+SI Sbjct: 760 FVRTITKQMQAIVGISLLEILSKHSSDEVYLGQRDTPE-WTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.924e-12 Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSEPGVTCKGVPNSVSI 326 FL+ + + LQ +++++ LS H+ DE YLG+R+ P W+ D E AF F N + NR G PY LL P+SE G+T KG+PNSVSI Sbjct: 756 FLKTITAQLQTLLGVSLIEILSRHTTDEIYLGQRESPE-WTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 860
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11 Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSE------PGVTCKGVPNSVSI 326 F+ + S +Q +++++ LS HS DE YLG+R P W+ D + E F FS N DP +NR G PY LL P++ G+T KG+PNS+SI Sbjct: 752 FIHTITSQIQTIIGVSLLEVLSKHSSDELYLGQRDTPE-WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
BLAST of CX297679 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 9 FLQALPSVLQATKYMAVVDTLSTHSPDEEYLGERQQPWIWSGDGEITEAFFEFSGXXXXXXXXXXXXNSDPSRRNRCGAGVLPYELLVPSSE-PGVTCKGVPNSVSI 326 +L+ + ++A ++V++ LS H+ DE YLG+R P W+ + + +AF F N D S RNR G +PY +L+P+ E G+T +G+PNS+SI Sbjct: 757 YLRTITGKVEAIVDLSVIEILSRHASDEVYLGQRDNP-NWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIPNSISI 862 The following BLAST results are available for this feature:
BLAST of CX297679 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297679 ID=CX297679; Name=CX297679; organism=Citrus clementina; type=EST; length=719bpback to top |