CX297689

Overview
NameCX297689
Unique NameCX297689
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.310e-51
Identity = 100/140 (71.43%), Postives = 115/140 (82.14%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            +LIP +TSGES VFYYKMKGDY+RYLAEF    DRK+AA++SL           ++LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+  E  + + GD
Sbjct:  107 HLIPCATSGESKVFYYKMKGDYHRYLAEFATGSDRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVDPNAGD 246          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.323e-51
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            L+P+S +G+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +E  E+ K
Sbjct:  117 LVPASANGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIK 253          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.323e-51
Identity = 98/136 (72.06%), Postives = 116/136 (85.29%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQ 419
            +L+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD+L+EESYKDSTLIMQLLRDNLTLWTSD+ E+  E+
Sbjct:  114 HLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEE 249          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.374e-51
Identity = 99/138 (71.74%), Postives = 116/138 (84.06%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            NLI ++++G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +EG E+ K
Sbjct:  111 NLIRAASTGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSSYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGTEEMK 248          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433B_TOBAC (14-3-3-like protein B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.374e-51
Identity = 99/144 (68.75%), Postives = 117/144 (81.25%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAE 446
            LIPS+++G+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K  +   E
Sbjct:  110 LIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKETKTDNE 253          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 7.374e-51
Identity = 98/138 (71.01%), Postives = 116/138 (84.06%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            +L+PS+T+ ES VFY KMKGDY+RYLAEFK   +RKEAA+++L           ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD  E+GG++ K
Sbjct:  113 HLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIK 250          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14334_ORYSJ (14-3-3-like protein GF14-D OS=Oryza sativa subsp. japonica GN=GF14D PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.374e-51
Identity = 100/149 (67.11%), Postives = 119/149 (79.87%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PG 458
            +L+PS+ + ES VFY KMKGDY+RYLAEFK  D+RK+AA+ ++           ++L PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELDSL EESYKDSTLIMQLLRDNLTLWTSD  ++GG++ K  E  A   PG
Sbjct:  117 HLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLRDNLTLWTSDANDDGGDEIK--EAAAPKEPG 263          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.630e-51
Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            LIPS+ SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LA +AFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++GG++ K
Sbjct:  114 LIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIK 250          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 9.630e-51
Identity = 97/137 (70.80%), Postives = 114/137 (83.21%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            LIP++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++  ++ K
Sbjct:  111 LIPAAASGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIK 247          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.258e-50
Identity = 98/137 (71.53%), Postives = 113/137 (82.48%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            LIPS+  G+S VFY KMKGDY+RYLAEFK   +RK+AA+ +L           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K
Sbjct:  114 LIPSAALGDSKVFYLKMKGDYHRYLAEFKSGAERKDAAESTLTAYKSAQDIANTELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250          
The following BLAST results are available for this feature:
BLAST of CX297689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433E_DROME3.310e-5171.4314-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
14334_ARATH4.323e-5171.5314-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14332_ORYSJ4.323e-5172.0614-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
1433F_TOBAC7.374e-5171.7414-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]
1433B_TOBAC7.374e-5168.7514-3-3-like protein B OS=Nicotiana tabacum PE=2 SV... [more]
14336_ORYSJ7.374e-5171.0114-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14334_ORYSJ7.374e-5167.1114-3-3-like protein GF14-D OS=Oryza sativa subsp. ... [more]
1433_OENEH9.630e-5171.5314-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14332_ARATH9.630e-5170.8014-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
1433A_VICFA1.258e-5071.5314-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC06004B11SK RindPdig24 Citrus clementina cDNA clone C06004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297689 ID=CX297689; Name=CX297689; organism=Citrus clementina; type=EST; length=763bp
GAGGTTGATGAAACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTG
TTTTACTATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAA
AGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACG
AGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATC
AGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAA
CTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCGA
TTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTT
ATTATGCAGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACC
GGAGGAGGGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCT
AGCCGGGGATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCT
AATATCTATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGT
ATAATACTTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGT
TTACAAAAAAAAAAGGCCGCTCTTTGTGCTGCAGCTAGAGTATATAAATT
CTGAAAGAGAGTAAGCGACTAAGCGCTATAGAAAAGGACAAAAGAGAGAG
AGGCTGGAGAAATGGCTACTTGCTTGTGGATTCATCCGCATCAGCATCAG
CCTCAGCATCATC
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